RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
RFX1-201ENST00000254325 MT1GP13640 62 aa5.25□□□□□ -1.57
RFX1-201ENST00000254325 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
RFX1-201ENST00000254325 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
RFX1-201ENST00000254325 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
RFX1-201ENST00000254325 MT1MQ8N339 61 aa5.16□□□□□ -1.58
RFX1-201ENST00000254325 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
RFX1-201ENST00000254325 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
RFX1-201ENST00000254325 KRTAP9-2Q9BYQ4 174 aa5.08□□□□□ -1.6
RFX1-201ENST00000254325 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
RFX1-201ENST00000254325 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
RFX1-201ENST00000254325 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
RFX1-201ENST00000254325 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
RFX1-201ENST00000254325 SPRR2EP22531 72 aa4.97□□□□□ -1.61
RFX1-201ENST00000254325 SPRR2BP35325 72 aa4.97□□□□□ -1.61
RFX1-201ENST00000254325 SPRR2AP35326 72 aa4.97□□□□□ -1.61
RFX1-201ENST00000254325 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
RFX1-201ENST00000254325 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
RFX1-201ENST00000254325 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
RFX1-201ENST00000254325 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
RFX1-201ENST00000254325 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
RFX1-201ENST00000254325 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
RFX1-201ENST00000254325 SPRR2DP22532 72 aa4.77□□□□□ -1.65
RFX1-201ENST00000254325 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
RFX1-201ENST00000254325 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
RFX1-201ENST00000254325 MT1AP04731 61 aa4.63□□□□□ -1.67
RFX1-201ENST00000254325 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
RFX1-201ENST00000254325 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
RFX1-201ENST00000254325 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.68
RFX1-201ENST00000254325 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
RFX1-201ENST00000254325 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
RFX1-201ENST00000254325 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
RFX1-201ENST00000254325 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
RFX1-201ENST00000254325 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
RFX1-201ENST00000254325 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
RFX1-201ENST00000254325 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
RFX1-201ENST00000254325 MT3P25713 68 aa4.34□□□□□ -1.72
RFX1-201ENST00000254325 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.72
RFX1-201ENST00000254325 PRM1P04553 51 aa4.29□□□□□ -1.72
RFX1-201ENST00000254325 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
RFX1-201ENST00000254325 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
RFX1-201ENST00000254325 MT4P47944 62 aa4.25□□□□□ -1.73
RFX1-201ENST00000254325 NEBP20929 6669 aa4.05□□□□□ -1.76
RFX1-201ENST00000254325 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
RFX1-201ENST00000254325 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
RFX1-201ENST00000254325 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
RFX1-201ENST00000254325 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
RFX1-201ENST00000254325 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
RFX1-201ENST00000254325 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
RFX1-201ENST00000254325 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
RFX1-201ENST00000254325 LCE1DQ5T752 114 aa3.84□□□□□ -1.8
RFX1-201ENST00000254325 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
RFX1-201ENST00000254325 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
RFX1-201ENST00000254325 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
RFX1-201ENST00000254325 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
RFX1-201ENST00000254325 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
RFX1-201ENST00000254325 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
RFX1-201ENST00000254325 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
RFX1-201ENST00000254325 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
RFX1-201ENST00000254325 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
RFX1-201ENST00000254325 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
RFX1-201ENST00000254325 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
RFX1-201ENST00000254325 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
RFX1-201ENST00000254325 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
RFX1-201ENST00000254325 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
RFX1-201ENST00000254325 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
RFX1-201ENST00000254325 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
RFX1-201ENST00000254325 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
RFX1-201ENST00000254325 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
RFX1-201ENST00000254325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
RFX1-201ENST00000254325 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
RFX1-201ENST00000254325 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
RFX1-201ENST00000254325 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
RFX1-201ENST00000254325 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
RFX1-201ENST00000254325 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
RFX1-201ENST00000254325 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
RFX1-201ENST00000254325 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 45.4 ms