RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
ATP6V1F-201ENST00000249289 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
ATP6V1F-201ENST00000249289 ROMO1P60602 79 aa5.61□□□□□ -1.51
ATP6V1F-201ENST00000249289 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
ATP6V1F-201ENST00000249289 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
ATP6V1F-201ENST00000249289 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
ATP6V1F-201ENST00000249289 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
ATP6V1F-201ENST00000249289 SPRR2DP22532 72 aa5.5□□□□□ -1.53
ATP6V1F-201ENST00000249289 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
ATP6V1F-201ENST00000249289 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
ATP6V1F-201ENST00000249289 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
ATP6V1F-201ENST00000249289 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
ATP6V1F-201ENST00000249289 MT1LQ93083 61 aa5.43□□□□□ -1.54
ATP6V1F-201ENST00000249289 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
ATP6V1F-201ENST00000249289 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
ATP6V1F-201ENST00000249289 MT1GP13640 62 aa5.41□□□□□ -1.54
ATP6V1F-201ENST00000249289 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
ATP6V1F-201ENST00000249289 MT1MQ8N339 61 aa5.32□□□□□ -1.56
ATP6V1F-201ENST00000249289 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
ATP6V1F-201ENST00000249289 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
ATP6V1F-201ENST00000249289 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
ATP6V1F-201ENST00000249289 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
ATP6V1F-201ENST00000249289 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
ATP6V1F-201ENST00000249289 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
ATP6V1F-201ENST00000249289 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
ATP6V1F-201ENST00000249289 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
ATP6V1F-201ENST00000249289 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
ATP6V1F-201ENST00000249289 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
ATP6V1F-201ENST00000249289 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
ATP6V1F-201ENST00000249289 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
ATP6V1F-201ENST00000249289 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
ATP6V1F-201ENST00000249289 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
ATP6V1F-201ENST00000249289 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
ATP6V1F-201ENST00000249289 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
ATP6V1F-201ENST00000249289 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
ATP6V1F-201ENST00000249289 MT4P47944 62 aa4.77□□□□□ -1.65
ATP6V1F-201ENST00000249289 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
ATP6V1F-201ENST00000249289 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
ATP6V1F-201ENST00000249289 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
ATP6V1F-201ENST00000249289 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
ATP6V1F-201ENST00000249289 MT1AP04731 61 aa4.63□□□□□ -1.67
ATP6V1F-201ENST00000249289 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
ATP6V1F-201ENST00000249289 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
ATP6V1F-201ENST00000249289 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
ATP6V1F-201ENST00000249289 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
ATP6V1F-201ENST00000249289 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
ATP6V1F-201ENST00000249289 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
ATP6V1F-201ENST00000249289 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
ATP6V1F-201ENST00000249289 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
ATP6V1F-201ENST00000249289 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
ATP6V1F-201ENST00000249289 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
ATP6V1F-201ENST00000249289 MT3P25713 68 aa4.21□□□□□ -1.74
ATP6V1F-201ENST00000249289 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
ATP6V1F-201ENST00000249289 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
ATP6V1F-201ENST00000249289 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
ATP6V1F-201ENST00000249289 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
ATP6V1F-201ENST00000249289 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
ATP6V1F-201ENST00000249289 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
ATP6V1F-201ENST00000249289 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
ATP6V1F-201ENST00000249289 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
ATP6V1F-201ENST00000249289 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
ATP6V1F-201ENST00000249289 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
ATP6V1F-201ENST00000249289 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
ATP6V1F-201ENST00000249289 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
ATP6V1F-201ENST00000249289 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
ATP6V1F-201ENST00000249289 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
ATP6V1F-201ENST00000249289 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
ATP6V1F-201ENST00000249289 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
ATP6V1F-201ENST00000249289 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1F-201ENST00000249289 INE1O15225 51 aa3.05□□□□□ -1.92
ATP6V1F-201ENST00000249289 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
ATP6V1F-201ENST00000249289 PRM1P04553 51 aa2.88□□□□□ -1.95
ATP6V1F-201ENST00000249289 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ATP6V1F-201ENST00000249289 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
ATP6V1F-201ENST00000249289 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
ATP6V1F-201ENST00000249289 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
ATP6V1F-201ENST00000249289 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 28 ms