RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
SCRN1-201ENST00000242059 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
SCRN1-201ENST00000242059 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
SCRN1-201ENST00000242059 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SCRN1-201ENST00000242059 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SCRN1-201ENST00000242059 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
SCRN1-201ENST00000242059 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
SCRN1-201ENST00000242059 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
SCRN1-201ENST00000242059 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
SCRN1-201ENST00000242059 KMT2DO14686 5537 aa3.21□□□□□ -1.9
SCRN1-201ENST00000242059 MT4P47944 62 aa3.2□□□□□ -1.9
SCRN1-201ENST00000242059 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
SCRN1-201ENST00000242059 MT3P25713 68 aa3.18□□□□□ -1.9
SCRN1-201ENST00000242059 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
SCRN1-201ENST00000242059 MT1LQ93083 61 aa3.17□□□□□ -1.9
SCRN1-201ENST00000242059 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
SCRN1-201ENST00000242059 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.9
SCRN1-201ENST00000242059 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.9
SCRN1-201ENST00000242059 MT1EP04732 61 aa3.13□□□□□ -1.91
SCRN1-201ENST00000242059 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SCRN1-201ENST00000242059 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
SCRN1-201ENST00000242059 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
SCRN1-201ENST00000242059 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
SCRN1-201ENST00000242059 MT1MQ8N339 61 aa3.07□□□□□ -1.92
SCRN1-201ENST00000242059 SSPOA2VEC9 5147 aa3.03□□□□□ -1.92
SCRN1-201ENST00000242059 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
SCRN1-201ENST00000242059 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
SCRN1-201ENST00000242059 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
SCRN1-201ENST00000242059 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
SCRN1-201ENST00000242059 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SCRN1-201ENST00000242059 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SCRN1-201ENST00000242059 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
SCRN1-201ENST00000242059 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
SCRN1-201ENST00000242059 MT1AP04731 61 aa2.91□□□□□ -1.94
SCRN1-201ENST00000242059 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.95
SCRN1-201ENST00000242059 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
SCRN1-201ENST00000242059 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
SCRN1-201ENST00000242059 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
SCRN1-201ENST00000242059 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
SCRN1-201ENST00000242059 PRM1P04553 51 aa2.79□□□□□ -1.96
SCRN1-201ENST00000242059 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
SCRN1-201ENST00000242059 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
SCRN1-201ENST00000242059 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SCRN1-201ENST00000242059 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
SCRN1-201ENST00000242059 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
SCRN1-201ENST00000242059 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
SCRN1-201ENST00000242059 NEBP20929 6669 aa2.64□□□□□ -1.99
SCRN1-201ENST00000242059 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SCRN1-201ENST00000242059 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
SCRN1-201ENST00000242059 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
SCRN1-201ENST00000242059 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
SCRN1-201ENST00000242059 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SCRN1-201ENST00000242059 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
SCRN1-201ENST00000242059 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
SCRN1-201ENST00000242059 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
SCRN1-201ENST00000242059 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
SCRN1-201ENST00000242059 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
SCRN1-201ENST00000242059 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
SCRN1-201ENST00000242059 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
SCRN1-201ENST00000242059 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
SCRN1-201ENST00000242059 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.09
SCRN1-201ENST00000242059 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
SCRN1-201ENST00000242059 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
SCRN1-201ENST00000242059 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
SCRN1-201ENST00000242059 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
SCRN1-201ENST00000242059 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SCRN1-201ENST00000242059 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SCRN1-201ENST00000242059 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
SCRN1-201ENST00000242059 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
SCRN1-201ENST00000242059 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
SCRN1-201ENST00000242059 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
SCRN1-201ENST00000242059 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SCRN1-201ENST00000242059 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
SCRN1-201ENST00000242059 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SCRN1-201ENST00000242059 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SCRN1-201ENST00000242059 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
SCRN1-201ENST00000242059 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 98.6 ms