RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
PITRM1-201ENST00000224949 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
PITRM1-201ENST00000224949 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PITRM1-201ENST00000224949 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
PITRM1-201ENST00000224949 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
PITRM1-201ENST00000224949 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
PITRM1-201ENST00000224949 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
PITRM1-201ENST00000224949 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
PITRM1-201ENST00000224949 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
PITRM1-201ENST00000224949 MT1MQ8N339 61 aa3.95□□□□□ -1.78
PITRM1-201ENST00000224949 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
PITRM1-201ENST00000224949 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
PITRM1-201ENST00000224949 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
PITRM1-201ENST00000224949 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
PITRM1-201ENST00000224949 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
PITRM1-201ENST00000224949 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
PITRM1-201ENST00000224949 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
PITRM1-201ENST00000224949 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
PITRM1-201ENST00000224949 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
PITRM1-201ENST00000224949 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
PITRM1-201ENST00000224949 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
PITRM1-201ENST00000224949 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
PITRM1-201ENST00000224949 PRM1P04553 51 aa3.64□□□□□ -1.83
PITRM1-201ENST00000224949 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
PITRM1-201ENST00000224949 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
PITRM1-201ENST00000224949 MT1AP04731 61 aa3.57□□□□□ -1.84
PITRM1-201ENST00000224949 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
PITRM1-201ENST00000224949 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
PITRM1-201ENST00000224949 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
PITRM1-201ENST00000224949 SPRR2EP22531 72 aa3.37□□□□□ -1.87
PITRM1-201ENST00000224949 SPRR2BP35325 72 aa3.37□□□□□ -1.87
PITRM1-201ENST00000224949 SPRR2AP35326 72 aa3.37□□□□□ -1.87
PITRM1-201ENST00000224949 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
PITRM1-201ENST00000224949 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
PITRM1-201ENST00000224949 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
PITRM1-201ENST00000224949 MT3P25713 68 aa3.21□□□□□ -1.9
PITRM1-201ENST00000224949 SPRR2DP22532 72 aa3.2□□□□□ -1.9
PITRM1-201ENST00000224949 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
PITRM1-201ENST00000224949 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
PITRM1-201ENST00000224949 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
PITRM1-201ENST00000224949 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
PITRM1-201ENST00000224949 MT4P47944 62 aa2.95□□□□□ -1.94
PITRM1-201ENST00000224949 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
PITRM1-201ENST00000224949 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
PITRM1-201ENST00000224949 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
PITRM1-201ENST00000224949 NEBP20929 6669 aa2.79□□□□□ -1.96
PITRM1-201ENST00000224949 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
PITRM1-201ENST00000224949 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
PITRM1-201ENST00000224949 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PITRM1-201ENST00000224949 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
PITRM1-201ENST00000224949 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
PITRM1-201ENST00000224949 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
PITRM1-201ENST00000224949 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
PITRM1-201ENST00000224949 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PITRM1-201ENST00000224949 LCE4AQ5TA78 99 aa2.58□□□□□ -2
PITRM1-201ENST00000224949 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
PITRM1-201ENST00000224949 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
PITRM1-201ENST00000224949 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PITRM1-201ENST00000224949 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
PITRM1-201ENST00000224949 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
PITRM1-201ENST00000224949 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
PITRM1-201ENST00000224949 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
PITRM1-201ENST00000224949 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PITRM1-201ENST00000224949 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
PITRM1-201ENST00000224949 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
PITRM1-201ENST00000224949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PITRM1-201ENST00000224949 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
PITRM1-201ENST00000224949 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PITRM1-201ENST00000224949 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
PITRM1-201ENST00000224949 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
PITRM1-201ENST00000224949 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
PITRM1-201ENST00000224949 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
PITRM1-201ENST00000224949 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PITRM1-201ENST00000224949 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
PITRM1-201ENST00000224949 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
PITRM1-201ENST00000224949 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
PITRM1-201ENST00000224949 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 71.8 ms