RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 SPRR2AP35326 72 aa4.38□□□□□ -1.71
HDAC7-201ENST00000080059 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
HDAC7-201ENST00000080059 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
HDAC7-201ENST00000080059 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
HDAC7-201ENST00000080059 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
HDAC7-201ENST00000080059 KMT2DO14686 5537 aa4.28□□□□□ -1.72
HDAC7-201ENST00000080059 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
HDAC7-201ENST00000080059 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
HDAC7-201ENST00000080059 MT1MQ8N339 61 aa4.23□□□□□ -1.73
HDAC7-201ENST00000080059 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
HDAC7-201ENST00000080059 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
HDAC7-201ENST00000080059 SPRR2DP22532 72 aa4.21□□□□□ -1.74
HDAC7-201ENST00000080059 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
HDAC7-201ENST00000080059 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
HDAC7-201ENST00000080059 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
HDAC7-201ENST00000080059 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
HDAC7-201ENST00000080059 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
HDAC7-201ENST00000080059 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
HDAC7-201ENST00000080059 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
HDAC7-201ENST00000080059 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HDAC7-201ENST00000080059 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
HDAC7-201ENST00000080059 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
HDAC7-201ENST00000080059 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
HDAC7-201ENST00000080059 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HDAC7-201ENST00000080059 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
HDAC7-201ENST00000080059 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
HDAC7-201ENST00000080059 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
HDAC7-201ENST00000080059 MT1AP04731 61 aa3.83□□□□□ -1.8
HDAC7-201ENST00000080059 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
HDAC7-201ENST00000080059 MT4P47944 62 aa3.8□□□□□ -1.8
HDAC7-201ENST00000080059 MT3P25713 68 aa3.8□□□□□ -1.8
HDAC7-201ENST00000080059 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
HDAC7-201ENST00000080059 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
HDAC7-201ENST00000080059 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
HDAC7-201ENST00000080059 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
HDAC7-201ENST00000080059 PRM1P04553 51 aa3.65□□□□□ -1.83
HDAC7-201ENST00000080059 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.84
HDAC7-201ENST00000080059 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
HDAC7-201ENST00000080059 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
HDAC7-201ENST00000080059 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
HDAC7-201ENST00000080059 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
HDAC7-201ENST00000080059 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
HDAC7-201ENST00000080059 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
HDAC7-201ENST00000080059 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
HDAC7-201ENST00000080059 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
HDAC7-201ENST00000080059 NEBP20929 6669 aa3.25□□□□□ -1.89
HDAC7-201ENST00000080059 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
HDAC7-201ENST00000080059 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
HDAC7-201ENST00000080059 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
HDAC7-201ENST00000080059 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
HDAC7-201ENST00000080059 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
HDAC7-201ENST00000080059 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
HDAC7-201ENST00000080059 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
HDAC7-201ENST00000080059 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
HDAC7-201ENST00000080059 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
HDAC7-201ENST00000080059 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
HDAC7-201ENST00000080059 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
HDAC7-201ENST00000080059 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
HDAC7-201ENST00000080059 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
HDAC7-201ENST00000080059 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
HDAC7-201ENST00000080059 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
HDAC7-201ENST00000080059 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
HDAC7-201ENST00000080059 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
HDAC7-201ENST00000080059 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
HDAC7-201ENST00000080059 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
HDAC7-201ENST00000080059 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
HDAC7-201ENST00000080059 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
HDAC7-201ENST00000080059 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
HDAC7-201ENST00000080059 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
HDAC7-201ENST00000080059 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
HDAC7-201ENST00000080059 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
HDAC7-201ENST00000080059 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
HDAC7-201ENST00000080059 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
HDAC7-201ENST00000080059 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
HDAC7-201ENST00000080059 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
HDAC7-201ENST00000080059 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
HDAC7-201ENST00000080059 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 27.4 ms