RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 KRTAP19-3Q7Z4W3 81 aa8.72□□□□□ -1.01
RTN4R-201ENST00000043402 KRTAP4-3Q9BYR4 195 aa8.69□□□□□ -1.02
RTN4R-201ENST00000043402 MACF1Q9UPN3 7388 aaKnown RBP8.69□□□□□ -1.02
RTN4R-201ENST00000043402 MT1MQ8N339 61 aa8.66□□□□□ -1.02
RTN4R-201ENST00000043402 MT1GP13640 62 aa8.65□□□□□ -1.02
RTN4R-201ENST00000043402 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
RTN4R-201ENST00000043402 SPRR2FQ96RM1 72 aa8.6□□□□□ -1.03
RTN4R-201ENST00000043402 KRTAP2-3P0C7H8 128 aa8.57□□□□□ -1.04
RTN4R-201ENST00000043402 KRTAP2-4Q9BYR9 128 aa8.57□□□□□ -1.04
RTN4R-201ENST00000043402 KRTAP2-1Q9BYU5 128 aa8.57□□□□□ -1.04
RTN4R-201ENST00000043402 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
RTN4R-201ENST00000043402 LCE5AQ5TCM9 118 aa8.51□□□□□ -1.05
RTN4R-201ENST00000043402 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
RTN4R-201ENST00000043402 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
RTN4R-201ENST00000043402 DSTQ03001 7570 aaKnown RBP8.35□□□□□ -1.07
RTN4R-201ENST00000043402 MDN1Q9NU22 5596 aa8.25□□□□□ -1.09
RTN4R-201ENST00000043402 KRTAP5-9P26371 169 aa8.22□□□□□ -1.09
RTN4R-201ENST00000043402 LCE1AQ5T7P2 110 aa8.13□□□□□ -1.11
RTN4R-201ENST00000043402 SPRR2EP22531 72 aa7.95□□□□□ -1.14
RTN4R-201ENST00000043402 SPRR2BP35325 72 aa7.95□□□□□ -1.14
RTN4R-201ENST00000043402 SPRR2AP35326 72 aa7.95□□□□□ -1.14
RTN4R-201ENST00000043402 KRTAP6-1Q3LI64 71 aa7.77□□□□□ -1.17
RTN4R-201ENST00000043402 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
RTN4R-201ENST00000043402 KRTAP5-5Q701N2 237 aaPredicted RBP7.74□□□□□ -1.17
RTN4R-201ENST00000043402 LCE3BQ5TA77 95 aa7.72□□□□□ -1.17
RTN4R-201ENST00000043402 MT1AP04731 61 aa7.71□□□□□ -1.18
RTN4R-201ENST00000043402 KRTAP6-3Q3LI67 103 aa7.71□□□□□ -1.18
RTN4R-201ENST00000043402 SPRR2DP22532 72 aa7.61□□□□□ -1.19
RTN4R-201ENST00000043402 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
RTN4R-201ENST00000043402 SYNE1Q8NF91 8797 aaKnown RBP7.58□□□□□ -1.2
RTN4R-201ENST00000043402 KRTAP12-4P60329 112 aa7.52□□□□□ -1.21
RTN4R-201ENST00000043402 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
RTN4R-201ENST00000043402 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
RTN4R-201ENST00000043402 NEBP20929 6669 aa7.21□□□□□ -1.26
RTN4R-201ENST00000043402 LCE3DQ9BYE3 92 aa7.17□□□□□ -1.26
RTN4R-201ENST00000043402 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
RTN4R-201ENST00000043402 KRTAP6-2Q3LI66 62 aa7.03□□□□□ -1.28
RTN4R-201ENST00000043402 LCE3EQ5T5B0 92 aa7.03□□□□□ -1.28
RTN4R-201ENST00000043402 KRTAP5-4Q6L8H1 288 aa7.02□□□□□ -1.29
RTN4R-201ENST00000043402 MT3P25713 68 aa6.93□□□□□ -1.3
RTN4R-201ENST00000043402 OBSCNQ5VST9 7968 aa6.77□□□□□ -1.33
RTN4R-201ENST00000043402 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
RTN4R-201ENST00000043402 MT4P47944 62 aa6.7□□□□□ -1.34
RTN4R-201ENST00000043402 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
RTN4R-201ENST00000043402 PRM1P04553 51 aa6.62□□□□□ -1.35
RTN4R-201ENST00000043402 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
RTN4R-201ENST00000043402 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
RTN4R-201ENST00000043402 HMCN1Q96RW7 5635 aa6.49□□□□□ -1.37
RTN4R-201ENST00000043402 KRTAP5-2Q701N4 177 aa6.49□□□□□ -1.37
RTN4R-201ENST00000043402 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
RTN4R-201ENST00000043402 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
RTN4R-201ENST00000043402 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
RTN4R-201ENST00000043402 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
RTN4R-201ENST00000043402 LCE1EQ5T753 118 aa5.81□□□□□ -1.48
RTN4R-201ENST00000043402 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
RTN4R-201ENST00000043402 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
RTN4R-201ENST00000043402 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
RTN4R-201ENST00000043402 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
RTN4R-201ENST00000043402 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
RTN4R-201ENST00000043402 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
RTN4R-201ENST00000043402 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
RTN4R-201ENST00000043402 KRTAP5-8O75690 187 aa5.33□□□□□ -1.56
RTN4R-201ENST00000043402 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
RTN4R-201ENST00000043402 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
RTN4R-201ENST00000043402 KRTAP21-2Q3LI59 83 aa5.05□□□□□ -1.6
RTN4R-201ENST00000043402 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
RTN4R-201ENST00000043402 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
RTN4R-201ENST00000043402 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
RTN4R-201ENST00000043402 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
RTN4R-201ENST00000043402 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
RTN4R-201ENST00000043402 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
RTN4R-201ENST00000043402 KRTAP21-1Q3LI58 79 aa4.17□□□□□ -1.74
RTN4R-201ENST00000043402 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
RTN4R-201ENST00000043402 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
RTN4R-201ENST00000043402 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
RTN4R-201ENST00000043402 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
RTN4R-201ENST00000043402 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms