RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 RBM12B-AS1Q9P1G2 102 aa8.79□□□□□ -1
PHGDH-232ENST00000641947 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
PHGDH-232ENST00000641947 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
PHGDH-232ENST00000641947 LCA10Q71F78 164 aa8.73□□□□□ -1.01
PHGDH-232ENST00000641947 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
PHGDH-232ENST00000641947 Q1T7F1 81 aa8.71□□□□□ -1.01
PHGDH-232ENST00000641947 S4R3F8 94 aa8.69□□□□□ -1.02
PHGDH-232ENST00000641947 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-232ENST00000641947 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
PHGDH-232ENST00000641947 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
PHGDH-232ENST00000641947 V9GYY9 64 aa8.61□□□□□ -1.03
PHGDH-232ENST00000641947 PSPHP1O15172 72 aa8.6□□□□□ -1.03
PHGDH-232ENST00000641947 SPTSSBQ8NFR3 76 aa8.59□□□□□ -1.03
PHGDH-232ENST00000641947 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
PHGDH-232ENST00000641947 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
PHGDH-232ENST00000641947 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
PHGDH-232ENST00000641947 Q5VV11 94 aa8.53□□□□□ -1.04
PHGDH-232ENST00000641947 A0A1B0GU69 56 aa8.48□□□□□ -1.05
PHGDH-232ENST00000641947 CSAG1Q6PB30 78 aa8.46□□□□□ -1.05
PHGDH-232ENST00000641947 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
PHGDH-232ENST00000641947 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-232ENST00000641947 SEC61GP60059 68 aa8.37□□□□□ -1.07
PHGDH-232ENST00000641947 MT1HP80294 61 aa8.35□□□□□ -1.07
PHGDH-232ENST00000641947 P0C880 135 aa8.33□□□□□ -1.08
PHGDH-232ENST00000641947 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
PHGDH-232ENST00000641947 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
PHGDH-232ENST00000641947 A6NED7 52 aa8.28□□□□□ -1.08
PHGDH-232ENST00000641947 H0YAA0 97 aa8.28□□□□□ -1.08
PHGDH-232ENST00000641947 A8MU10 97 aa8.26□□□□□ -1.09
PHGDH-232ENST00000641947 A0A1B0GU33 70 aa8.24□□□□□ -1.09
PHGDH-232ENST00000641947 UQCR11O14957 56 aa8.21□□□□□ -1.1
PHGDH-232ENST00000641947 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
PHGDH-232ENST00000641947 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
PHGDH-232ENST00000641947 M0R2T5 61 aa8.18□□□□□ -1.1
PHGDH-232ENST00000641947 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
PHGDH-232ENST00000641947 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-232ENST00000641947 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.11
PHGDH-232ENST00000641947 KTN1-AS1Q86SY8 53 aa8.12□□□□□ -1.11
PHGDH-232ENST00000641947 A6NN06 94 aa8.1□□□□□ -1.11
PHGDH-232ENST00000641947 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
PHGDH-232ENST00000641947 MT2AP02795 61 aa8.03□□□□□ -1.12
PHGDH-232ENST00000641947 LCE2AQ5TA79 106 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-232ENST00000641947 M0QZ58 72 aa8.01□□□□□ -1.13
PHGDH-232ENST00000641947 MT1FP04733 61 aa7.99□□□□□ -1.13
PHGDH-232ENST00000641947 R4GN34 69 aa7.99□□□□□ -1.13
PHGDH-232ENST00000641947 A0A0D9SG42 100 aa7.97□□□□□ -1.13
PHGDH-232ENST00000641947 KRTAP10-10P60014 251 aa7.89□□□□□ -1.15
PHGDH-232ENST00000641947 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
PHGDH-232ENST00000641947 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
PHGDH-232ENST00000641947 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
PHGDH-232ENST00000641947 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
PHGDH-232ENST00000641947 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
PHGDH-232ENST00000641947 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
PHGDH-232ENST00000641947 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
PHGDH-232ENST00000641947 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
PHGDH-232ENST00000641947 K7ERS5 55 aa7.67□□□□□ -1.18
PHGDH-232ENST00000641947 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
PHGDH-232ENST00000641947 PRAC1Q96KF2 57 aa7.6□□□□□ -1.19
PHGDH-232ENST00000641947 LCE2BO14633 110 aa7.57□□□□□ -1.2
PHGDH-232ENST00000641947 MT1BP07438 61 aa7.56□□□□□ -1.2
PHGDH-232ENST00000641947 USH2AO75445 5202 aa7.49□□□□□ -1.21
PHGDH-232ENST00000641947 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
PHGDH-232ENST00000641947 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.21
PHGDH-232ENST00000641947 ROMO1P60602 79 aa7.45□□□□□ -1.22
PHGDH-232ENST00000641947 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
PHGDH-232ENST00000641947 MT1XP80297 61 aa7.32□□□□□ -1.24
PHGDH-232ENST00000641947 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
PHGDH-232ENST00000641947 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
PHGDH-232ENST00000641947 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
PHGDH-232ENST00000641947 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
PHGDH-232ENST00000641947 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
PHGDH-232ENST00000641947 TNP1P09430 55 aa7.1□□□□□ -1.27
PHGDH-232ENST00000641947 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
PHGDH-232ENST00000641947 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
PHGDH-232ENST00000641947 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-232ENST00000641947 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
PHGDH-232ENST00000641947 H3BS24 57 aa6.94□□□□□ -1.3
PHGDH-232ENST00000641947 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
PHGDH-232ENST00000641947 KMT2DO14686 5537 aa6.91□□□□□ -1.3
PHGDH-232ENST00000641947 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
PHGDH-232ENST00000641947 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
PHGDH-232ENST00000641947 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
PHGDH-232ENST00000641947 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
PHGDH-232ENST00000641947 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
PHGDH-232ENST00000641947 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
PHGDH-232ENST00000641947 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
PHGDH-232ENST00000641947 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
PHGDH-232ENST00000641947 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
PHGDH-232ENST00000641947 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
PHGDH-232ENST00000641947 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
PHGDH-232ENST00000641947 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
PHGDH-232ENST00000641947 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
PHGDH-232ENST00000641947 NDUFAF8A1L188 74 aa6.46□□□□□ -1.38
PHGDH-232ENST00000641947 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
PHGDH-232ENST00000641947 KRTAP9-6A0A140TA67 174 aa6.41□□□□□ -1.38
PHGDH-232ENST00000641947 MT1EP04732 61 aa6.4□□□□□ -1.38
PHGDH-232ENST00000641947 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
PHGDH-232ENST00000641947 MT1LQ93083 61 aa6.26□□□□□ -1.41
PHGDH-232ENST00000641947 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
PHGDH-232ENST00000641947 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms