RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 COA5Q86WW8 74 aa6.7□□□□□ -1.34
PHGDH-221ENST00000641573 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
PHGDH-221ENST00000641573 A8MUN3 132 aa6.69□□□□□ -1.34
PHGDH-221ENST00000641573 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
PHGDH-221ENST00000641573 MPLKIPQ8TAP9 179 aa6.65□□□□□ -1.34
PHGDH-221ENST00000641573 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
PHGDH-221ENST00000641573 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
PHGDH-221ENST00000641573 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
PHGDH-221ENST00000641573 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
PHGDH-221ENST00000641573 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
PHGDH-221ENST00000641573 LCE2BO14633 110 aa6.55□□□□□ -1.36
PHGDH-221ENST00000641573 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
PHGDH-221ENST00000641573 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
PHGDH-221ENST00000641573 MT1HP80294 61 aa6.53□□□□□ -1.36
PHGDH-221ENST00000641573 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
PHGDH-221ENST00000641573 S4R3F8 94 aa6.5□□□□□ -1.37
PHGDH-221ENST00000641573 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-221ENST00000641573 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-221ENST00000641573 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
PHGDH-221ENST00000641573 LCA10Q71F78 164 aa6.48□□□□□ -1.37
PHGDH-221ENST00000641573 M0R2T5 61 aa6.47□□□□□ -1.37
PHGDH-221ENST00000641573 Q1T7F1 81 aa6.45□□□□□ -1.38
PHGDH-221ENST00000641573 V9GYY9 64 aa6.44□□□□□ -1.38
PHGDH-221ENST00000641573 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
PHGDH-221ENST00000641573 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
PHGDH-221ENST00000641573 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
PHGDH-221ENST00000641573 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
PHGDH-221ENST00000641573 PSPHP1O15172 72 aa6.35□□□□□ -1.39
PHGDH-221ENST00000641573 A0A1B0GU69 56 aa6.33□□□□□ -1.4
PHGDH-221ENST00000641573 SEC61GP60059 68 aa6.31□□□□□ -1.4
PHGDH-221ENST00000641573 Q5VV11 94 aa6.29□□□□□ -1.4
PHGDH-221ENST00000641573 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
PHGDH-221ENST00000641573 USH2AO75445 5202 aa6.25□□□□□ -1.41
PHGDH-221ENST00000641573 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-221ENST00000641573 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
PHGDH-221ENST00000641573 H0YAA0 97 aa6.2□□□□□ -1.42
PHGDH-221ENST00000641573 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
PHGDH-221ENST00000641573 A6NED7 52 aa6.16□□□□□ -1.42
PHGDH-221ENST00000641573 P0C880 135 aa6.16□□□□□ -1.42
PHGDH-221ENST00000641573 A0A1B0GU33 70 aa6.15□□□□□ -1.42
PHGDH-221ENST00000641573 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
PHGDH-221ENST00000641573 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
PHGDH-221ENST00000641573 UQCR11O14957 56 aa6.12□□□□□ -1.43
PHGDH-221ENST00000641573 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
PHGDH-221ENST00000641573 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
PHGDH-221ENST00000641573 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
PHGDH-221ENST00000641573 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
PHGDH-221ENST00000641573 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
PHGDH-221ENST00000641573 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
PHGDH-221ENST00000641573 A8MU10 97 aa6.01□□□□□ -1.45
PHGDH-221ENST00000641573 M0QZ58 72 aa6□□□□□ -1.45
PHGDH-221ENST00000641573 MT2AP02795 61 aa5.98□□□□□ -1.45
PHGDH-221ENST00000641573 R4GN34 69 aa5.97□□□□□ -1.45
PHGDH-221ENST00000641573 CRIPTQ9P021 101 aa5.95□□□□□ -1.46
PHGDH-221ENST00000641573 MT1FP04733 61 aa5.94□□□□□ -1.46
PHGDH-221ENST00000641573 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
PHGDH-221ENST00000641573 A0A0D9SG42 100 aa5.93□□□□□ -1.46
PHGDH-221ENST00000641573 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
PHGDH-221ENST00000641573 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
PHGDH-221ENST00000641573 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
PHGDH-221ENST00000641573 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
PHGDH-221ENST00000641573 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
PHGDH-221ENST00000641573 NEBP20929 6669 aa5.82□□□□□ -1.48
PHGDH-221ENST00000641573 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
PHGDH-221ENST00000641573 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
PHGDH-221ENST00000641573 K7ERS5 55 aa5.79□□□□□ -1.48
PHGDH-221ENST00000641573 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
PHGDH-221ENST00000641573 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
PHGDH-221ENST00000641573 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
PHGDH-221ENST00000641573 A6NN06 94 aa5.76□□□□□ -1.49
PHGDH-221ENST00000641573 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
PHGDH-221ENST00000641573 KRTAP19-8Q3LI54 63 aa5.69□□□□□ -1.5
PHGDH-221ENST00000641573 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
PHGDH-221ENST00000641573 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
PHGDH-221ENST00000641573 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
PHGDH-221ENST00000641573 MT1BP07438 61 aa5.62□□□□□ -1.51
PHGDH-221ENST00000641573 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
PHGDH-221ENST00000641573 ROMO1P60602 79 aa5.56□□□□□ -1.52
PHGDH-221ENST00000641573 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
PHGDH-221ENST00000641573 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
PHGDH-221ENST00000641573 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
PHGDH-221ENST00000641573 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
PHGDH-221ENST00000641573 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
PHGDH-221ENST00000641573 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
PHGDH-221ENST00000641573 KMT2DO14686 5537 aa5.44□□□□□ -1.54
PHGDH-221ENST00000641573 MT1XP80297 61 aa5.42□□□□□ -1.54
PHGDH-221ENST00000641573 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
PHGDH-221ENST00000641573 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
PHGDH-221ENST00000641573 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
PHGDH-221ENST00000641573 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
PHGDH-221ENST00000641573 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
PHGDH-221ENST00000641573 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
PHGDH-221ENST00000641573 TNP1P09430 55 aa5.33□□□□□ -1.56
PHGDH-221ENST00000641573 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
PHGDH-221ENST00000641573 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
PHGDH-221ENST00000641573 SPRR2EP22531 72 aa5.26□□□□□ -1.57
PHGDH-221ENST00000641573 SPRR2BP35325 72 aa5.26□□□□□ -1.57
PHGDH-221ENST00000641573 SPRR2AP35326 72 aa5.26□□□□□ -1.57
PHGDH-221ENST00000641573 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
PHGDH-221ENST00000641573 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms