RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 RYR3Q15413 4870 aa2.61□□□□□ -1.99
HNRNPU-230ENST00000640657 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
HNRNPU-230ENST00000640657 KRTAP17-1Q9BYP8 105 aa2.61□□□□□ -1.99
HNRNPU-230ENST00000640657 DNAH6Q9C0G6 4158 aa2.6□□□□□ -1.99
HNRNPU-230ENST00000640657 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
HNRNPU-230ENST00000640657 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
HNRNPU-230ENST00000640657 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
HNRNPU-230ENST00000640657 TPRXLQ17RH7 258 aa2.59□□□□□ -1.99
HNRNPU-230ENST00000640657 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP3-1Q9BYR8 98 aa2.59□□□□□ -2
HNRNPU-230ENST00000640657 DNAH2Q9P225 4427 aa2.59□□□□□ -2
HNRNPU-230ENST00000640657 LCE2CQ5TA81 110 aa2.58□□□□□ -2
HNRNPU-230ENST00000640657 FLG2Q5D862 2391 aaPredicted RBP2.57□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP15-1Q3LI76 137 aa2.57□□□□□ -2
HNRNPU-230ENST00000640657 DMBT1Q9UGM3 2413 aaPredicted RBP2.56□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP9-6A0A140TA67 174 aa2.56□□□□□ -2
HNRNPU-230ENST00000640657 SACSQ9NZJ4 4579 aa2.56□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
HNRNPU-230ENST00000640657 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
HNRNPU-230ENST00000640657 XP32Q5T750 250 aa2.53□□□□□ -2
HNRNPU-230ENST00000640657 Q5VSD8 79 aa2.53□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP12-1P59990 96 aa2.53□□□□□ -2
HNRNPU-230ENST00000640657 KRTAP12-2P59991 146 aa2.53□□□□□ -2
HNRNPU-230ENST00000640657 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2.01
HNRNPU-230ENST00000640657 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
HNRNPU-230ENST00000640657 TNP1P09430 55 aa2.51□□□□□ -2.01
HNRNPU-230ENST00000640657 FAT1Q14517 4588 aa2.5□□□□□ -2.01
HNRNPU-230ENST00000640657 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
HNRNPU-230ENST00000640657 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
HNRNPU-230ENST00000640657 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
HNRNPU-230ENST00000640657 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
HNRNPU-230ENST00000640657 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
HNRNPU-230ENST00000640657 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
HNRNPU-230ENST00000640657 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
HNRNPU-230ENST00000640657 RYR2Q92736 4967 aa2.47□□□□□ -2.01
HNRNPU-230ENST00000640657 ALMS1Q8TCU4 4167 aa2.47□□□□□ -2.01
HNRNPU-230ENST00000640657 LRP1BQ9NZR2 4599 aa2.47□□□□□ -2.01
HNRNPU-230ENST00000640657 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
HNRNPU-230ENST00000640657 KRTAP10-8P60410 259 aa2.46□□□□□ -2.01
HNRNPU-230ENST00000640657 MYCBP2O75592 4640 aa2.45□□□□□ -2.02
HNRNPU-230ENST00000640657 DNAH8Q96JB1 4490 aa2.45□□□□□ -2.02
HNRNPU-230ENST00000640657 DNAH5Q8TE73 4624 aa2.45□□□□□ -2.02
HNRNPU-230ENST00000640657 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
HNRNPU-230ENST00000640657 PKD1P98161 4303 aa2.44□□□□□ -2.02
HNRNPU-230ENST00000640657 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
HNRNPU-230ENST00000640657 RYR1P21817 5038 aa2.43□□□□□ -2.02
HNRNPU-230ENST00000640657 LRP1Q07954 4544 aaKnown RBP2.41□□□□□ -2.02
HNRNPU-230ENST00000640657 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
HNRNPU-230ENST00000640657 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
HNRNPU-230ENST00000640657 A0A1B0GVY2 172 aa2.4□□□□□ -2.02
HNRNPU-230ENST00000640657 HSPG2P98160 4391 aa2.4□□□□□ -2.02
HNRNPU-230ENST00000640657 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
HNRNPU-230ENST00000640657 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.03
HNRNPU-230ENST00000640657 KRTAP23-1A1A580 65 aa2.39□□□□□ -2.03
HNRNPU-230ENST00000640657 KRTAP19-1Q8IUB9 90 aa2.38□□□□□ -2.03
HNRNPU-230ENST00000640657 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
HNRNPU-230ENST00000640657 HERC1Q15751 4861 aa2.37□□□□□ -2.03
HNRNPU-230ENST00000640657 INE1O15225 51 aa2.36□□□□□ -2.03
HNRNPU-230ENST00000640657 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
HNRNPU-230ENST00000640657 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
HNRNPU-230ENST00000640657 ABCA13Q86UQ4 5058 aa2.35□□□□□ -2.03
HNRNPU-230ENST00000640657 M0R2T5 61 aa2.34□□□□□ -2.03
HNRNPU-230ENST00000640657 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.04
HNRNPU-230ENST00000640657 MUC2Q02817 5179 aa2.33□□□□□ -2.04
HNRNPU-230ENST00000640657 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
HNRNPU-230ENST00000640657 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
HNRNPU-230ENST00000640657 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
HNRNPU-230ENST00000640657 LCE1DQ5T752 114 aa2.31□□□□□ -2.04
HNRNPU-230ENST00000640657 HERC2O95714 4834 aa2.31□□□□□ -2.04
HNRNPU-230ENST00000640657 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
HNRNPU-230ENST00000640657 LPAP08519 4548 aa2.26□□□□□ -2.05
HNRNPU-230ENST00000640657 LRP2P98164 4655 aa2.26□□□□□ -2.05
HNRNPU-230ENST00000640657 UBR4Q5T4S7 5183 aa2.26□□□□□ -2.05
HNRNPU-230ENST00000640657 KRTAP4-5Q9BYR2 181 aa2.24□□□□□ -2.05
HNRNPU-230ENST00000640657 MT1HL1P0DM35 61 aa2.23□□□□□ -2.05
HNRNPU-230ENST00000640657 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
HNRNPU-230ENST00000640657 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
HNRNPU-230ENST00000640657 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
HNRNPU-230ENST00000640657 TNXBP22105 4242 aa2.19□□□□□ -2.06
HNRNPU-230ENST00000640657 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
HNRNPU-230ENST00000640657 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
HNRNPU-230ENST00000640657 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
HNRNPU-230ENST00000640657 KRTAP9-8Q9BYQ0 159 aa2.11□□□□□ -2.07
HNRNPU-230ENST00000640657 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
HNRNPU-230ENST00000640657 KRTAP12-3P60328 96 aa2.09□□□□□ -2.08
HNRNPU-230ENST00000640657 FSIP2Q5CZC0 6907 aa2.08□□□□□ -2.08
HNRNPU-230ENST00000640657 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
HNRNPU-230ENST00000640657 MUC17Q685J3 4493 aa2.06□□□□□ -2.08
HNRNPU-230ENST00000640657 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
HNRNPU-230ENST00000640657 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
HNRNPU-230ENST00000640657 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
HNRNPU-230ENST00000640657 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
HNRNPU-230ENST00000640657 KRTAP19-4Q3LI73 84 aa2.01□□□□□ -2.09
HNRNPU-230ENST00000640657 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
HNRNPU-230ENST00000640657 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
HNRNPU-230ENST00000640657 USH2AO75445 5202 aa2□□□□□ -2.09
HNRNPU-230ENST00000640657 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
HNRNPU-230ENST00000640657 KRTAP9-3Q9BYQ3 159 aa1.95□□□□□ -2.1
HNRNPU-230ENST00000640657 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms