RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
CHD1L-211ENST00000639534 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
CHD1L-211ENST00000639534 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.22
CHD1L-211ENST00000639534 HERC2O95714 4834 aa7.39□□□□□ -1.23
CHD1L-211ENST00000639534 UQCR11O14957 56 aa7.38□□□□□ -1.23
CHD1L-211ENST00000639534 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
CHD1L-211ENST00000639534 S4R3F8 94 aa7.37□□□□□ -1.23
CHD1L-211ENST00000639534 LCA10Q71F78 164 aa7.36□□□□□ -1.23
CHD1L-211ENST00000639534 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
CHD1L-211ENST00000639534 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
CHD1L-211ENST00000639534 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CHD1L-211ENST00000639534 A8MU10 97 aa7.25□□□□□ -1.25
CHD1L-211ENST00000639534 A0A1B0GU33 70 aa7.24□□□□□ -1.25
CHD1L-211ENST00000639534 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
CHD1L-211ENST00000639534 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
CHD1L-211ENST00000639534 LRP2P98164 4655 aa7.17□□□□□ -1.26
CHD1L-211ENST00000639534 LPAP08519 4548 aa7.13□□□□□ -1.27
CHD1L-211ENST00000639534 A6NN06 94 aa7.11□□□□□ -1.27
CHD1L-211ENST00000639534 H0YAA0 97 aa7.1□□□□□ -1.27
CHD1L-211ENST00000639534 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
CHD1L-211ENST00000639534 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
CHD1L-211ENST00000639534 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
CHD1L-211ENST00000639534 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
CHD1L-211ENST00000639534 K7ERS5 55 aa7.01□□□□□ -1.29
CHD1L-211ENST00000639534 P0C880 135 aa6.99□□□□□ -1.29
CHD1L-211ENST00000639534 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
CHD1L-211ENST00000639534 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
CHD1L-211ENST00000639534 M0QZ58 72 aa6.95□□□□□ -1.3
CHD1L-211ENST00000639534 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.3
CHD1L-211ENST00000639534 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
CHD1L-211ENST00000639534 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
CHD1L-211ENST00000639534 HERC1Q15751 4861 aa6.83□□□□□ -1.32
CHD1L-211ENST00000639534 A0A0D9SG42 100 aa6.83□□□□□ -1.32
CHD1L-211ENST00000639534 R4GN34 69 aa6.8□□□□□ -1.32
CHD1L-211ENST00000639534 LCE2BO14633 110 aa6.76□□□□□ -1.33
CHD1L-211ENST00000639534 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
CHD1L-211ENST00000639534 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
CHD1L-211ENST00000639534 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
CHD1L-211ENST00000639534 ROMO1P60602 79 aa6.69□□□□□ -1.34
CHD1L-211ENST00000639534 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
CHD1L-211ENST00000639534 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
CHD1L-211ENST00000639534 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.35
CHD1L-211ENST00000639534 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
CHD1L-211ENST00000639534 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
CHD1L-211ENST00000639534 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
CHD1L-211ENST00000639534 M0R2T5 61 aa6.6□□□□□ -1.35
CHD1L-211ENST00000639534 MT1HP80294 61 aa6.6□□□□□ -1.35
CHD1L-211ENST00000639534 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
CHD1L-211ENST00000639534 MUC2Q02817 5179 aa6.5□□□□□ -1.37
CHD1L-211ENST00000639534 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
CHD1L-211ENST00000639534 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
CHD1L-211ENST00000639534 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
CHD1L-211ENST00000639534 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
CHD1L-211ENST00000639534 MT2AP02795 61 aa6.41□□□□□ -1.38
CHD1L-211ENST00000639534 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
CHD1L-211ENST00000639534 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
CHD1L-211ENST00000639534 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
CHD1L-211ENST00000639534 MT1FP04733 61 aa6.35□□□□□ -1.39
CHD1L-211ENST00000639534 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
CHD1L-211ENST00000639534 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
CHD1L-211ENST00000639534 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
CHD1L-211ENST00000639534 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
CHD1L-211ENST00000639534 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
CHD1L-211ENST00000639534 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
CHD1L-211ENST00000639534 TNP1P09430 55 aa6.16□□□□□ -1.42
CHD1L-211ENST00000639534 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
CHD1L-211ENST00000639534 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CHD1L-211ENST00000639534 MT1BP07438 61 aa6.08□□□□□ -1.44
CHD1L-211ENST00000639534 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
CHD1L-211ENST00000639534 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
CHD1L-211ENST00000639534 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
CHD1L-211ENST00000639534 MT1XP80297 61 aa5.93□□□□□ -1.46
CHD1L-211ENST00000639534 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
CHD1L-211ENST00000639534 H3BS24 57 aa5.81□□□□□ -1.48
CHD1L-211ENST00000639534 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CHD1L-211ENST00000639534 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
CHD1L-211ENST00000639534 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
CHD1L-211ENST00000639534 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
CHD1L-211ENST00000639534 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
CHD1L-211ENST00000639534 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
CHD1L-211ENST00000639534 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
CHD1L-211ENST00000639534 USH2AO75445 5202 aa5.51□□□□□ -1.53
CHD1L-211ENST00000639534 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
CHD1L-211ENST00000639534 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
CHD1L-211ENST00000639534 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
CHD1L-211ENST00000639534 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
CHD1L-211ENST00000639534 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
CHD1L-211ENST00000639534 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
CHD1L-211ENST00000639534 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
CHD1L-211ENST00000639534 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
CHD1L-211ENST00000639534 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
CHD1L-211ENST00000639534 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
CHD1L-211ENST00000639534 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
CHD1L-211ENST00000639534 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
CHD1L-211ENST00000639534 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
CHD1L-211ENST00000639534 MT1EP04732 61 aa5.2□□□□□ -1.58
CHD1L-211ENST00000639534 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
CHD1L-211ENST00000639534 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
CHD1L-211ENST00000639534 MT1LQ93083 61 aa5.14□□□□□ -1.59
CHD1L-211ENST00000639534 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms