RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
SCARB2-212ENST00000638663 H1FX-AS1Q4G0G2 97 aa10.88□□□□□ -0.67
SCARB2-212ENST00000638663 SPTSSBQ8NFR3 76 aa10.88□□□□□ -0.67
SCARB2-212ENST00000638663 SVIPQ8NHG7 77 aa10.87□□□□□ -0.67
SCARB2-212ENST00000638663 LCA10Q71F78 164 aa10.84□□□□□ -0.67
SCARB2-212ENST00000638663 S4R3F8 94 aa10.84□□□□□ -0.67
SCARB2-212ENST00000638663 Q5VV11 94 aa10.8□□□□□ -0.68
SCARB2-212ENST00000638663 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
SCARB2-212ENST00000638663 A0A1B0GU69 56 aa10.75□□□□□ -0.69
SCARB2-212ENST00000638663 MUC2Q02817 5179 aa10.71□□□□□ -0.7
SCARB2-212ENST00000638663 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
SCARB2-212ENST00000638663 SEC61GP60059 68 aa10.64□□□□□ -0.71
SCARB2-212ENST00000638663 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
SCARB2-212ENST00000638663 A6NED7 52 aa10.57□□□□□ -0.72
SCARB2-212ENST00000638663 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
SCARB2-212ENST00000638663 BRK1Q8WUW1 75 aa10.54□□□□□ -0.72
SCARB2-212ENST00000638663 RNF213Q63HN8 5207 aa10.5□□□□□ -0.73
SCARB2-212ENST00000638663 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SCARB2-212ENST00000638663 UQCR11O14957 56 aa10.43□□□□□ -0.74
SCARB2-212ENST00000638663 PRO0628Q9UI54 55 aa10.43□□□□□ -0.74
SCARB2-212ENST00000638663 A8MU10 97 aa10.42□□□□□ -0.74
SCARB2-212ENST00000638663 KRTAP10-6P60371 365 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-212ENST00000638663 A0A1B0GU33 70 aa10.4□□□□□ -0.74
SCARB2-212ENST00000638663 ADM2Q7Z4H4 148 aa10.39□□□□□ -0.75
SCARB2-212ENST00000638663 LCE2CQ5TA81 110 aa10.39□□□□□ -0.75
SCARB2-212ENST00000638663 FLGP20930 4061 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-212ENST00000638663 CDC42SE1Q9NRR8 79 aa10.37□□□□□ -0.75
SCARB2-212ENST00000638663 P0C880 135 aa10.36□□□□□ -0.75
SCARB2-212ENST00000638663 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
SCARB2-212ENST00000638663 SPATA8Q6RVD6 105 aa10.31□□□□□ -0.76
SCARB2-212ENST00000638663 H0YAA0 97 aa10.3□□□□□ -0.76
SCARB2-212ENST00000638663 FAT4Q6V0I7 4981 aa10.27□□□□□ -0.77
SCARB2-212ENST00000638663 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
SCARB2-212ENST00000638663 MT1HP80294 61 aa10.17□□□□□ -0.78
SCARB2-212ENST00000638663 M0R2T5 61 aa10.12□□□□□ -0.79
SCARB2-212ENST00000638663 LORP23490 312 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-212ENST00000638663 M0QZ58 72 aa10.03□□□□□ -0.8
SCARB2-212ENST00000638663 A0A0D9SG42 100 aa10.03□□□□□ -0.8
SCARB2-212ENST00000638663 R4GN34 69 aa10□□□□□ -0.81
SCARB2-212ENST00000638663 PMAIP1Q13794 54 aa9.95□□□□□ -0.82
SCARB2-212ENST00000638663 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
SCARB2-212ENST00000638663 A6NN06 94 aa9.87□□□□□ -0.83
SCARB2-212ENST00000638663 K7ERS5 55 aa9.82□□□□□ -0.84
SCARB2-212ENST00000638663 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
SCARB2-212ENST00000638663 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
SCARB2-212ENST00000638663 MT2AP02795 61 aa9.8□□□□□ -0.84
SCARB2-212ENST00000638663 KRTAP12-2P59991 146 aa9.78□□□□□ -0.84
SCARB2-212ENST00000638663 KRTAP12-1P59990 96 aa9.77□□□□□ -0.85
SCARB2-212ENST00000638663 SPINT4Q6UDR6 99 aa9.77□□□□□ -0.85
SCARB2-212ENST00000638663 MT1FP04733 61 aa9.76□□□□□ -0.85
SCARB2-212ENST00000638663 KRTAP10-10P60014 251 aa9.74□□□□□ -0.85
SCARB2-212ENST00000638663 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-212ENST00000638663 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
SCARB2-212ENST00000638663 KRTAP19-1Q8IUB9 90 aa9.61□□□□□ -0.87
SCARB2-212ENST00000638663 KTN1-AS1Q86SY8 53 aa9.58□□□□□ -0.88
SCARB2-212ENST00000638663 ROMO1P60602 79 aa9.44□□□□□ -0.9
SCARB2-212ENST00000638663 KRTAP9-3Q9BYQ3 159 aa9.44□□□□□ -0.9
SCARB2-212ENST00000638663 CAMK2N1Q7Z7J9 78 aa9.39□□□□□ -0.91
SCARB2-212ENST00000638663 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
SCARB2-212ENST00000638663 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
SCARB2-212ENST00000638663 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
SCARB2-212ENST00000638663 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
SCARB2-212ENST00000638663 MT1BP07438 61 aa9.25□□□□□ -0.93
SCARB2-212ENST00000638663 LCE2BO14633 110 aa9.19□□□□□ -0.94
SCARB2-212ENST00000638663 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
SCARB2-212ENST00000638663 MT1XP80297 61 aa8.97□□□□□ -0.97
SCARB2-212ENST00000638663 KRTAP10-5P60370 271 aa8.95□□□□□ -0.98
SCARB2-212ENST00000638663 USH2AO75445 5202 aa8.94□□□□□ -0.98
SCARB2-212ENST00000638663 TNP1P09430 55 aa8.92□□□□□ -0.98
SCARB2-212ENST00000638663 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
SCARB2-212ENST00000638663 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-212ENST00000638663 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
SCARB2-212ENST00000638663 KRTAP10-7P60409 375 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-212ENST00000638663 SSPOA2VEC9 5147 aa8.63□□□□□ -1.03
SCARB2-212ENST00000638663 KRTAP23-1A1A580 65 aa8.61□□□□□ -1.03
SCARB2-212ENST00000638663 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
SCARB2-212ENST00000638663 KRTAP19-6Q3LI70 58 aa8.56□□□□□ -1.04
SCARB2-212ENST00000638663 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
SCARB2-212ENST00000638663 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
SCARB2-212ENST00000638663 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
SCARB2-212ENST00000638663 KRTAP8-1Q8IUC2 63 aa8.34□□□□□ -1.07
SCARB2-212ENST00000638663 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
SCARB2-212ENST00000638663 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
SCARB2-212ENST00000638663 KMT2DO14686 5537 aa8.29□□□□□ -1.08
SCARB2-212ENST00000638663 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-212ENST00000638663 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
SCARB2-212ENST00000638663 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.11
SCARB2-212ENST00000638663 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
SCARB2-212ENST00000638663 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
SCARB2-212ENST00000638663 KRTAP19-7Q3SYF9 63 aa8□□□□□ -1.13
SCARB2-212ENST00000638663 MT1EP04732 61 aa7.85□□□□□ -1.15
SCARB2-212ENST00000638663 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
SCARB2-212ENST00000638663 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
SCARB2-212ENST00000638663 MT1LQ93083 61 aa7.72□□□□□ -1.17
SCARB2-212ENST00000638663 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
SCARB2-212ENST00000638663 SPRR2FQ96RM1 72 aa7.66□□□□□ -1.18
SCARB2-212ENST00000638663 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
SCARB2-212ENST00000638663 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
SCARB2-212ENST00000638663 NDUFAF8A1L188 74 aa7.6□□□□□ -1.19
SCARB2-212ENST00000638663 H3BS24 57 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms