RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 CRIPTQ9P021 101 aa8.82□□□□□ -1
CLN6-222ENST00000637667 MUC12Q9UKN1 5478 aa8.81□□□□□ -1
CLN6-222ENST00000637667 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
CLN6-222ENST00000637667 ACYP1P07311 99 aa8.75□□□□□ -1.01
CLN6-222ENST00000637667 UQCRQO14949 82 aa8.74□□□□□ -1.01
CLN6-222ENST00000637667 PCP4L1A6NKN8 68 aa8.73□□□□□ -1.01
CLN6-222ENST00000637667 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
CLN6-222ENST00000637667 NDUFC1O43677 76 aa8.72□□□□□ -1.01
CLN6-222ENST00000637667 H0Y9P7 68 aa8.71□□□□□ -1.02
CLN6-222ENST00000637667 ATOX1O00244 68 aa8.71□□□□□ -1.02
CLN6-222ENST00000637667 HIST1H4AP62805 103 aaKnown RBP8.71□□□□□ -1.02
CLN6-222ENST00000637667 FAM240AA0A1B0GVK7 77 aa8.7□□□□□ -1.02
CLN6-222ENST00000637667 H0YAA0 97 aa8.69□□□□□ -1.02
CLN6-222ENST00000637667 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
CLN6-222ENST00000637667 KMT2DO14686 5537 aa8.63□□□□□ -1.03
CLN6-222ENST00000637667 A8MUN3 132 aa8.62□□□□□ -1.03
CLN6-222ENST00000637667 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
CLN6-222ENST00000637667 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
CLN6-222ENST00000637667 MDN1Q9NU22 5596 aa8.55□□□□□ -1.04
CLN6-222ENST00000637667 LINC00643Q86TS7 51 aa8.54□□□□□ -1.04
CLN6-222ENST00000637667 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
CLN6-222ENST00000637667 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
CLN6-222ENST00000637667 MP68P56378 58 aa8.48□□□□□ -1.05
CLN6-222ENST00000637667 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
CLN6-222ENST00000637667 OCR1Q9BZK8 76 aa8.47□□□□□ -1.05
CLN6-222ENST00000637667 MT1XP80297 61 aa8.45□□□□□ -1.06
CLN6-222ENST00000637667 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
CLN6-222ENST00000637667 R4GN34 69 aa8.39□□□□□ -1.07
CLN6-222ENST00000637667 P0C880 135 aa8.38□□□□□ -1.07
CLN6-222ENST00000637667 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
CLN6-222ENST00000637667 C20orf197Q8N268 126 aa8.37□□□□□ -1.07
CLN6-222ENST00000637667 H3BPC8 53 aa8.33□□□□□ -1.08
CLN6-222ENST00000637667 M0QZ58 72 aa8.32□□□□□ -1.08
CLN6-222ENST00000637667 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
CLN6-222ENST00000637667 SPRR2EP22531 72 aa8.3□□□□□ -1.08
CLN6-222ENST00000637667 SPRR2BP35325 72 aa8.3□□□□□ -1.08
CLN6-222ENST00000637667 SPRR2AP35326 72 aa8.3□□□□□ -1.08
CLN6-222ENST00000637667 KRTAP8-1Q8IUC2 63 aa8.29□□□□□ -1.08
CLN6-222ENST00000637667 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
CLN6-222ENST00000637667 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
CLN6-222ENST00000637667 A0A1B0GV90 55 aa8.24□□□□□ -1.09
CLN6-222ENST00000637667 SCGB1A1P11684 91 aa8.22□□□□□ -1.09
CLN6-222ENST00000637667 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
CLN6-222ENST00000637667 KRTAP2-2Q9BYT5 123 aa8.21□□□□□ -1.1
CLN6-222ENST00000637667 KRTAP2-1Q9BYU5 128 aa8.21□□□□□ -1.1
CLN6-222ENST00000637667 J3QR89 54 aa8.17□□□□□ -1.1
CLN6-222ENST00000637667 LCE1AQ5T7P2 110 aa8.17□□□□□ -1.1
CLN6-222ENST00000637667 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
CLN6-222ENST00000637667 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
CLN6-222ENST00000637667 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
CLN6-222ENST00000637667 ACYP2P14621 99 aa8.07□□□□□ -1.12
CLN6-222ENST00000637667 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
CLN6-222ENST00000637667 SPRR2DP22532 72 aa8.02□□□□□ -1.13
CLN6-222ENST00000637667 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
CLN6-222ENST00000637667 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
CLN6-222ENST00000637667 MT-ATP8P03928 68 aa8.01□□□□□ -1.13
CLN6-222ENST00000637667 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
CLN6-222ENST00000637667 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
CLN6-222ENST00000637667 GPR98Q8WXG9 6306 aa7.85□□□□□ -1.15
CLN6-222ENST00000637667 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
CLN6-222ENST00000637667 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
CLN6-222ENST00000637667 K7ERU9 68 aa7.75□□□□□ -1.17
CLN6-222ENST00000637667 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CLN6-222ENST00000637667 SPANXA2-OT1Q8N9U9 137 aa7.74□□□□□ -1.17
CLN6-222ENST00000637667 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
CLN6-222ENST00000637667 SERP2Q8N6R1 65 aa7.61□□□□□ -1.19
CLN6-222ENST00000637667 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
CLN6-222ENST00000637667 COA5Q86WW8 74 aa7.55□□□□□ -1.2
CLN6-222ENST00000637667 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
CLN6-222ENST00000637667 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
CLN6-222ENST00000637667 A0A0D9SG42 100 aa7.5□□□□□ -1.21
CLN6-222ENST00000637667 MT1EP04732 61 aa7.5□□□□□ -1.21
CLN6-222ENST00000637667 SEC61GP60059 68 aa7.48□□□□□ -1.21
CLN6-222ENST00000637667 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
CLN6-222ENST00000637667 KRTAP19-3Q7Z4W3 81 aa7.47□□□□□ -1.21
CLN6-222ENST00000637667 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
CLN6-222ENST00000637667 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
CLN6-222ENST00000637667 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
CLN6-222ENST00000637667 A0A1B0GU33 70 aa7.38□□□□□ -1.23
CLN6-222ENST00000637667 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
CLN6-222ENST00000637667 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
CLN6-222ENST00000637667 COX7CP15954 63 aa7.3□□□□□ -1.24
CLN6-222ENST00000637667 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
CLN6-222ENST00000637667 MT1GP13640 62 aa7.27□□□□□ -1.25
CLN6-222ENST00000637667 H7BZZ5 65 aa7.25□□□□□ -1.25
CLN6-222ENST00000637667 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
CLN6-222ENST00000637667 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
CLN6-222ENST00000637667 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
CLN6-222ENST00000637667 A0A1B0GU69 56 aa7.16□□□□□ -1.26
CLN6-222ENST00000637667 MT1MQ8N339 61 aa7.15□□□□□ -1.26
CLN6-222ENST00000637667 MT1LQ93083 61 aa7.14□□□□□ -1.27
CLN6-222ENST00000637667 A8MU10 97 aa7.12□□□□□ -1.27
CLN6-222ENST00000637667 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
CLN6-222ENST00000637667 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
CLN6-222ENST00000637667 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
CLN6-222ENST00000637667 HMCN1Q96RW7 5635 aa7.05□□□□□ -1.28
CLN6-222ENST00000637667 TNP1P09430 55 aa7.04□□□□□ -1.28
CLN6-222ENST00000637667 MT4P47944 62 aa7.03□□□□□ -1.28
CLN6-222ENST00000637667 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
CLN6-222ENST00000637667 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms