RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IMUPQ9GZP8 106 aa8□□□□□ -1.13
CLN6-220ENST00000637450 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
CLN6-220ENST00000637450 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
CLN6-220ENST00000637450 F8W1H4 67 aa7.96□□□□□ -1.14
CLN6-220ENST00000637450 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
CLN6-220ENST00000637450 GTF2H5Q6ZYL4 71 aa7.94□□□□□ -1.14
CLN6-220ENST00000637450 H0YAA0 97 aa7.92□□□□□ -1.14
CLN6-220ENST00000637450 NDUFC1O43677 76 aa7.91□□□□□ -1.14
CLN6-220ENST00000637450 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
CLN6-220ENST00000637450 UQCRQO14949 82 aa7.85□□□□□ -1.15
CLN6-220ENST00000637450 ATOX1O00244 68 aa7.83□□□□□ -1.16
CLN6-220ENST00000637450 H0Y9P7 68 aa7.82□□□□□ -1.16
CLN6-220ENST00000637450 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
CLN6-220ENST00000637450 ACYP1P07311 99 aa7.8□□□□□ -1.16
CLN6-220ENST00000637450 A8MUN3 132 aa7.79□□□□□ -1.16
CLN6-220ENST00000637450 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
CLN6-220ENST00000637450 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
CLN6-220ENST00000637450 ATP5EP2Q5VTU8 51 aa7.78□□□□□ -1.16
CLN6-220ENST00000637450 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
CLN6-220ENST00000637450 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
CLN6-220ENST00000637450 MT1XP80297 61 aa7.77□□□□□ -1.17
CLN6-220ENST00000637450 SPRR2FQ96RM1 72 aa7.76□□□□□ -1.17
CLN6-220ENST00000637450 FAM240AA0A1B0GVK7 77 aa7.73□□□□□ -1.17
CLN6-220ENST00000637450 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
CLN6-220ENST00000637450 SPRR2EP22531 72 aa7.7□□□□□ -1.18
CLN6-220ENST00000637450 SPRR2BP35325 72 aa7.7□□□□□ -1.18
CLN6-220ENST00000637450 SPRR2AP35326 72 aa7.7□□□□□ -1.18
CLN6-220ENST00000637450 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
CLN6-220ENST00000637450 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
CLN6-220ENST00000637450 PCP4L1A6NKN8 68 aa7.65□□□□□ -1.18
CLN6-220ENST00000637450 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
CLN6-220ENST00000637450 R4GN34 69 aa7.63□□□□□ -1.19
CLN6-220ENST00000637450 P0C880 135 aa7.61□□□□□ -1.19
CLN6-220ENST00000637450 MP68P56378 58 aa7.59□□□□□ -1.19
CLN6-220ENST00000637450 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
CLN6-220ENST00000637450 LINC00643Q86TS7 51 aa7.59□□□□□ -1.19
CLN6-220ENST00000637450 OCR1Q9BZK8 76 aa7.58□□□□□ -1.2
CLN6-220ENST00000637450 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
CLN6-220ENST00000637450 M0QZ58 72 aa7.56□□□□□ -1.2
CLN6-220ENST00000637450 KRTAP2-2Q9BYT5 123 aa7.52□□□□□ -1.21
CLN6-220ENST00000637450 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
CLN6-220ENST00000637450 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
CLN6-220ENST00000637450 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
CLN6-220ENST00000637450 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
CLN6-220ENST00000637450 H3BPC8 53 aa7.46□□□□□ -1.22
CLN6-220ENST00000637450 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
CLN6-220ENST00000637450 SPRR2DP22532 72 aa7.45□□□□□ -1.22
CLN6-220ENST00000637450 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
CLN6-220ENST00000637450 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
CLN6-220ENST00000637450 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
CLN6-220ENST00000637450 SCGB1A1P11684 91 aa7.31□□□□□ -1.24
CLN6-220ENST00000637450 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
CLN6-220ENST00000637450 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
CLN6-220ENST00000637450 ACYP2P14621 99 aa7.26□□□□□ -1.25
CLN6-220ENST00000637450 A0A1B0GV90 55 aa7.22□□□□□ -1.25
CLN6-220ENST00000637450 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
CLN6-220ENST00000637450 J3QR89 54 aa7.19□□□□□ -1.26
CLN6-220ENST00000637450 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
CLN6-220ENST00000637450 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
CLN6-220ENST00000637450 DSTQ03001 7570 aaKnown RBP7.03□□□□□ -1.28
CLN6-220ENST00000637450 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
CLN6-220ENST00000637450 GPR98Q8WXG9 6306 aa6.99□□□□□ -1.29
CLN6-220ENST00000637450 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
CLN6-220ENST00000637450 LCE5AQ5TCM9 118 aa6.96□□□□□ -1.3
CLN6-220ENST00000637450 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
CLN6-220ENST00000637450 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
CLN6-220ENST00000637450 MT1EP04732 61 aa6.9□□□□□ -1.3
CLN6-220ENST00000637450 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
CLN6-220ENST00000637450 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
CLN6-220ENST00000637450 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
CLN6-220ENST00000637450 K7ERU9 68 aa6.79□□□□□ -1.32
CLN6-220ENST00000637450 A0A0D9SG42 100 aa6.76□□□□□ -1.33
CLN6-220ENST00000637450 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
CLN6-220ENST00000637450 COA5Q86WW8 74 aa6.72□□□□□ -1.33
CLN6-220ENST00000637450 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
CLN6-220ENST00000637450 MT1GP13640 62 aa6.71□□□□□ -1.34
CLN6-220ENST00000637450 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
CLN6-220ENST00000637450 SEC61GP60059 68 aa6.7□□□□□ -1.34
CLN6-220ENST00000637450 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
CLN6-220ENST00000637450 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
CLN6-220ENST00000637450 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
CLN6-220ENST00000637450 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
CLN6-220ENST00000637450 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.35
CLN6-220ENST00000637450 A0A1B0GU33 70 aa6.63□□□□□ -1.35
CLN6-220ENST00000637450 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
CLN6-220ENST00000637450 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
CLN6-220ENST00000637450 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
CLN6-220ENST00000637450 MT1MQ8N339 61 aa6.58□□□□□ -1.36
CLN6-220ENST00000637450 MT1LQ93083 61 aa6.55□□□□□ -1.36
CLN6-220ENST00000637450 MT4P47944 62 aa6.53□□□□□ -1.36
CLN6-220ENST00000637450 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
CLN6-220ENST00000637450 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CLN6-220ENST00000637450 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
CLN6-220ENST00000637450 COX7CP15954 63 aa6.43□□□□□ -1.38
CLN6-220ENST00000637450 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
CLN6-220ENST00000637450 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
CLN6-220ENST00000637450 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
CLN6-220ENST00000637450 H7BZZ5 65 aa6.4□□□□□ -1.38
CLN6-220ENST00000637450 A8MU10 97 aa6.39□□□□□ -1.39
CLN6-220ENST00000637450 A0A1B0GU69 56 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms