RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 MT1GP13640 62 aa2.5□□□□□ -2.01
SCN2A-215ENST00000637266 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
SCN2A-215ENST00000637266 SPEGQ15772 3267 aa2.49□□□□□ -2.01
SCN2A-215ENST00000637266 HERC1Q15751 4861 aa2.49□□□□□ -2.01
SCN2A-215ENST00000637266 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
SCN2A-215ENST00000637266 LOC400499M0QZD8 3231 aa2.48□□□□□ -2.01
SCN2A-215ENST00000637266 AKAP9Q99996 3911 aa2.48□□□□□ -2.01
SCN2A-215ENST00000637266 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
SCN2A-215ENST00000637266 KRTAP4-1Q9BYQ7 146 aa2.47□□□□□ -2.01
SCN2A-215ENST00000637266 DCHS1Q96JQ0 3298 aa2.47□□□□□ -2.01
SCN2A-215ENST00000637266 ANK3Q12955 4377 aaKnown RBP2.46□□□□□ -2.02
SCN2A-215ENST00000637266 MT3P25713 68 aa2.46□□□□□ -2.02
SCN2A-215ENST00000637266 HSPG2P98160 4391 aa2.46□□□□□ -2.02
SCN2A-215ENST00000637266 LRP1BQ9NZR2 4599 aa2.45□□□□□ -2.02
SCN2A-215ENST00000637266 BSNQ9UPA5 3926 aa2.45□□□□□ -2.02
SCN2A-215ENST00000637266 ZFHX3Q15911 3703 aa2.44□□□□□ -2.02
SCN2A-215ENST00000637266 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
SCN2A-215ENST00000637266 TRRAPQ9Y4A5 3859 aa2.43□□□□□ -2.02
SCN2A-215ENST00000637266 DNAH7Q8WXX0 4024 aa2.43□□□□□ -2.02
SCN2A-215ENST00000637266 MYO15AQ9UKN7 3530 aa2.42□□□□□ -2.02
SCN2A-215ENST00000637266 FRAS1Q86XX4 4008 aa2.42□□□□□ -2.02
SCN2A-215ENST00000637266 MT1XP80297 61 aa2.42□□□□□ -2.02
SCN2A-215ENST00000637266 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
SCN2A-215ENST00000637266 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
SCN2A-215ENST00000637266 PLECQ15149 4684 aaKnown RBP2.4□□□□□ -2.03
SCN2A-215ENST00000637266 MT1LQ93083 61 aa2.4□□□□□ -2.03
SCN2A-215ENST00000637266 DNAH5Q8TE73 4624 aa2.4□□□□□ -2.03
SCN2A-215ENST00000637266 CUBNO60494 3623 aa2.39□□□□□ -2.03
SCN2A-215ENST00000637266 WDFY3Q8IZQ1 3526 aa2.39□□□□□ -2.03
SCN2A-215ENST00000637266 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
SCN2A-215ENST00000637266 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
SCN2A-215ENST00000637266 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
SCN2A-215ENST00000637266 LCE2BO14633 110 aa2.37□□□□□ -2.03
SCN2A-215ENST00000637266 HECTD4Q9Y4D8 3996 aa2.37□□□□□ -2.03
SCN2A-215ENST00000637266 MT1EP04732 61 aa2.36□□□□□ -2.03
SCN2A-215ENST00000637266 DNAH8Q96JB1 4490 aa2.35□□□□□ -2.03
SCN2A-215ENST00000637266 SPRR2EP22531 72 aa2.35□□□□□ -2.03
SCN2A-215ENST00000637266 SPRR2BP35325 72 aa2.35□□□□□ -2.03
SCN2A-215ENST00000637266 SPRR2AP35326 72 aa2.35□□□□□ -2.03
SCN2A-215ENST00000637266 VPS13DQ5THJ4 4388 aa2.35□□□□□ -2.03
SCN2A-215ENST00000637266 MT1BP07438 61 aa2.34□□□□□ -2.04
SCN2A-215ENST00000637266 MUC3AQ02505 3323 aa2.34□□□□□ -2.04
SCN2A-215ENST00000637266 ANK2Q01484 3957 aa2.33□□□□□ -2.04
SCN2A-215ENST00000637266 KRTAP17-1Q9BYP8 105 aa2.33□□□□□ -2.04
SCN2A-215ENST00000637266 NBPF19A0A087WUL8 3843 aa2.33□□□□□ -2.04
SCN2A-215ENST00000637266 SPRR2DP22532 72 aa2.33□□□□□ -2.04
SCN2A-215ENST00000637266 SPTBN5Q9NRC6 3674 aaKnown RBP2.32□□□□□ -2.04
SCN2A-215ENST00000637266 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
SCN2A-215ENST00000637266 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
SCN2A-215ENST00000637266 RELNP78509 3460 aa2.32□□□□□ -2.04
SCN2A-215ENST00000637266 SACSQ9NZJ4 4579 aa2.32□□□□□ -2.04
SCN2A-215ENST00000637266 PCLOQ9Y6V0 5065 aa2.31□□□□□ -2.04
SCN2A-215ENST00000637266 ZNF469Q96JG9 3925 aaPredicted RBP2.29□□□□□ -2.04
SCN2A-215ENST00000637266 KRTAP9-3Q9BYQ3 159 aa2.29□□□□□ -2.04
SCN2A-215ENST00000637266 KRTAP9-8Q9BYQ0 159 aa2.28□□□□□ -2.04
SCN2A-215ENST00000637266 LCE3BQ5TA77 95 aa2.27□□□□□ -2.05
SCN2A-215ENST00000637266 LRP2P98164 4655 aa2.27□□□□□ -2.05
SCN2A-215ENST00000637266 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
SCN2A-215ENST00000637266 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
SCN2A-215ENST00000637266 FAT1Q14517 4588 aa2.26□□□□□ -2.05
SCN2A-215ENST00000637266 CSMD1Q96PZ7 3565 aa2.26□□□□□ -2.05
SCN2A-215ENST00000637266 RYR2Q92736 4967 aa2.25□□□□□ -2.05
SCN2A-215ENST00000637266 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
SCN2A-215ENST00000637266 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
SCN2A-215ENST00000637266 BIRC6Q9NR09 4857 aa2.23□□□□□ -2.05
SCN2A-215ENST00000637266 LCE2CQ5TA81 110 aa2.22□□□□□ -2.05
SCN2A-215ENST00000637266 FLGP20930 4061 aaPredicted RBP2.21□□□□□ -2.06
SCN2A-215ENST00000637266 MT1MQ8N339 61 aa2.21□□□□□ -2.06
SCN2A-215ENST00000637266 RYR3Q15413 4870 aa2.21□□□□□ -2.06
SCN2A-215ENST00000637266 KRTAP19-6Q3LI70 58 aa2.2□□□□□ -2.06
SCN2A-215ENST00000637266 KMT2AQ03164 3969 aa2.2□□□□□ -2.06
SCN2A-215ENST00000637266 MT1AP04731 61 aa2.19□□□□□ -2.06
SCN2A-215ENST00000637266 PKHD1L1Q86WI1 4243 aa2.19□□□□□ -2.06
SCN2A-215ENST00000637266 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
SCN2A-215ENST00000637266 SPENQ96T58 3664 aaKnown RBP2.17□□□□□ -2.06
SCN2A-215ENST00000637266 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.06
SCN2A-215ENST00000637266 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.06
SCN2A-215ENST00000637266 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.06
SCN2A-215ENST00000637266 PKHD1P08F94 4074 aa2.15□□□□□ -2.06
SCN2A-215ENST00000637266 SMG1Q96Q15 3661 aaKnown RBP2.15□□□□□ -2.06
SCN2A-215ENST00000637266 ASPMQ8IZT6 3477 aa2.15□□□□□ -2.07
SCN2A-215ENST00000637266 PKD1P98161 4303 aa2.14□□□□□ -2.07
SCN2A-215ENST00000637266 FAT3Q8TDW7 4589 aa2.14□□□□□ -2.07
SCN2A-215ENST00000637266 LCE2DQ5TA82 110 aaPredicted RBP2.13□□□□□ -2.07
SCN2A-215ENST00000637266 LCE1AQ5T7P2 110 aa2.13□□□□□ -2.07
SCN2A-215ENST00000637266 LYSTQ99698 3801 aa2.12□□□□□ -2.07
SCN2A-215ENST00000637266 STARD9Q9P2P6 4700 aa2.11□□□□□ -2.07
SCN2A-215ENST00000637266 LAMA5O15230 3695 aa2.1□□□□□ -2.07
SCN2A-215ENST00000637266 HERC2O95714 4834 aa2.09□□□□□ -2.07
SCN2A-215ENST00000637266 SVEP1Q4LDE5 3571 aa2.09□□□□□ -2.07
SCN2A-215ENST00000637266 KRTAP19-2Q3LHN2 52 aa2.09□□□□□ -2.08
SCN2A-215ENST00000637266 CSMD2Q7Z408 3487 aa2.06□□□□□ -2.08
SCN2A-215ENST00000637266 PRM1P04553 51 aa2.05□□□□□ -2.08
SCN2A-215ENST00000637266 VPS13CQ709C8 3753 aa2.05□□□□□ -2.08
SCN2A-215ENST00000637266 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
SCN2A-215ENST00000637266 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
SCN2A-215ENST00000637266 DMDP11532 3685 aa2.03□□□□□ -2.08
SCN2A-215ENST00000637266 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
SCN2A-215ENST00000637266 CSMD3Q7Z407 3707 aa2.02□□□□□ -2.09
SCN2A-215ENST00000637266 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms