RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
PTBP1-221ENST00000635647 PKD1P98161 4303 aa7.63□□□□□ -1.19
PTBP1-221ENST00000635647 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
PTBP1-221ENST00000635647 S4R3F8 94 aa7.61□□□□□ -1.19
PTBP1-221ENST00000635647 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
PTBP1-221ENST00000635647 LUZP6Q538Z0 58 aa7.57□□□□□ -1.2
PTBP1-221ENST00000635647 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
PTBP1-221ENST00000635647 SACSQ9NZJ4 4579 aa7.48□□□□□ -1.21
PTBP1-221ENST00000635647 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
PTBP1-221ENST00000635647 XP32Q5T750 250 aa7.47□□□□□ -1.21
PTBP1-221ENST00000635647 TPRXLQ17RH7 258 aa7.46□□□□□ -1.21
PTBP1-221ENST00000635647 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
PTBP1-221ENST00000635647 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
PTBP1-221ENST00000635647 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
PTBP1-221ENST00000635647 KIAA1109Q2LD37 5005 aa7.37□□□□□ -1.23
PTBP1-221ENST00000635647 M0QZ58 72 aa7.35□□□□□ -1.23
PTBP1-221ENST00000635647 R4GN34 69 aa7.34□□□□□ -1.23
PTBP1-221ENST00000635647 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
PTBP1-221ENST00000635647 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
PTBP1-221ENST00000635647 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
PTBP1-221ENST00000635647 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
PTBP1-221ENST00000635647 RYR1P21817 5038 aa7.28□□□□□ -1.24
PTBP1-221ENST00000635647 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
PTBP1-221ENST00000635647 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
PTBP1-221ENST00000635647 RYR2Q92736 4967 aa7.21□□□□□ -1.25
PTBP1-221ENST00000635647 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
PTBP1-221ENST00000635647 RYR3Q15413 4870 aa7.2□□□□□ -1.26
PTBP1-221ENST00000635647 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
PTBP1-221ENST00000635647 PKHD1L1Q86WI1 4243 aa7.17□□□□□ -1.26
PTBP1-221ENST00000635647 HSPG2P98160 4391 aa7.17□□□□□ -1.26
PTBP1-221ENST00000635647 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
PTBP1-221ENST00000635647 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
PTBP1-221ENST00000635647 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
PTBP1-221ENST00000635647 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
PTBP1-221ENST00000635647 LRP2P98164 4655 aa7.09□□□□□ -1.27
PTBP1-221ENST00000635647 M0R2T5 61 aa7.08□□□□□ -1.28
PTBP1-221ENST00000635647 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
PTBP1-221ENST00000635647 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
PTBP1-221ENST00000635647 TNXBP22105 4242 aa7.01□□□□□ -1.29
PTBP1-221ENST00000635647 LPAP08519 4548 aa6.95□□□□□ -1.3
PTBP1-221ENST00000635647 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
PTBP1-221ENST00000635647 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
PTBP1-221ENST00000635647 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
PTBP1-221ENST00000635647 MUC2Q02817 5179 aa6.73□□□□□ -1.33
PTBP1-221ENST00000635647 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
PTBP1-221ENST00000635647 HERC2O95714 4834 aa6.7□□□□□ -1.34
PTBP1-221ENST00000635647 TNP1P09430 55 aa6.55□□□□□ -1.36
PTBP1-221ENST00000635647 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
PTBP1-221ENST00000635647 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
PTBP1-221ENST00000635647 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
PTBP1-221ENST00000635647 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
PTBP1-221ENST00000635647 HERC1Q15751 4861 aa6.43□□□□□ -1.38
PTBP1-221ENST00000635647 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
PTBP1-221ENST00000635647 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
PTBP1-221ENST00000635647 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
PTBP1-221ENST00000635647 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
PTBP1-221ENST00000635647 UBR4Q5T4S7 5183 aa6.2□□□□□ -1.42
PTBP1-221ENST00000635647 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
PTBP1-221ENST00000635647 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
PTBP1-221ENST00000635647 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.44
PTBP1-221ENST00000635647 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
PTBP1-221ENST00000635647 MT1HP80294 61 aa6□□□□□ -1.45
PTBP1-221ENST00000635647 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
PTBP1-221ENST00000635647 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
PTBP1-221ENST00000635647 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
PTBP1-221ENST00000635647 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
PTBP1-221ENST00000635647 MT1FP04733 61 aa5.97□□□□□ -1.45
PTBP1-221ENST00000635647 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
PTBP1-221ENST00000635647 MT2AP02795 61 aa5.94□□□□□ -1.46
PTBP1-221ENST00000635647 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
PTBP1-221ENST00000635647 USH2AO75445 5202 aa5.78□□□□□ -1.48
PTBP1-221ENST00000635647 INE1O15225 51 aa5.78□□□□□ -1.48
PTBP1-221ENST00000635647 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
PTBP1-221ENST00000635647 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
PTBP1-221ENST00000635647 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
PTBP1-221ENST00000635647 MT1BP07438 61 aa5.67□□□□□ -1.5
PTBP1-221ENST00000635647 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
PTBP1-221ENST00000635647 MT1XP80297 61 aa5.66□□□□□ -1.5
PTBP1-221ENST00000635647 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.51
PTBP1-221ENST00000635647 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
PTBP1-221ENST00000635647 KMT2DO14686 5537 aa5.63□□□□□ -1.51
PTBP1-221ENST00000635647 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
PTBP1-221ENST00000635647 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
PTBP1-221ENST00000635647 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
PTBP1-221ENST00000635647 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
PTBP1-221ENST00000635647 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
PTBP1-221ENST00000635647 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
PTBP1-221ENST00000635647 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
PTBP1-221ENST00000635647 LCE2BO14633 110 aa5.37□□□□□ -1.55
PTBP1-221ENST00000635647 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
PTBP1-221ENST00000635647 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
PTBP1-221ENST00000635647 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
PTBP1-221ENST00000635647 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
PTBP1-221ENST00000635647 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
PTBP1-221ENST00000635647 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
PTBP1-221ENST00000635647 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
PTBP1-221ENST00000635647 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
PTBP1-221ENST00000635647 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
PTBP1-221ENST00000635647 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
PTBP1-221ENST00000635647 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms