RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
BRCA1-230ENST00000634433 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
BRCA1-230ENST00000634433 PCOTHQ58A44 107 aa4.01□□□□□ -1.77
BRCA1-230ENST00000634433 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
BRCA1-230ENST00000634433 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-230ENST00000634433 Q5W150 140 aa4□□□□□ -1.77
BRCA1-230ENST00000634433 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
BRCA1-230ENST00000634433 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
BRCA1-230ENST00000634433 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
BRCA1-230ENST00000634433 Q5VSD8 79 aa3.99□□□□□ -1.77
BRCA1-230ENST00000634433 IGKV2-30P06310 120 aa3.96□□□□□ -1.77
BRCA1-230ENST00000634433 HERC1Q15751 4861 aa3.95□□□□□ -1.78
BRCA1-230ENST00000634433 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
BRCA1-230ENST00000634433 COA5Q86WW8 74 aa3.94□□□□□ -1.78
BRCA1-230ENST00000634433 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
BRCA1-230ENST00000634433 ACYP2P14621 99 aa3.93□□□□□ -1.78
BRCA1-230ENST00000634433 HRES1P13985 223 aa3.92□□□□□ -1.78
BRCA1-230ENST00000634433 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
BRCA1-230ENST00000634433 C9orf92A6NGG3 77 aa3.91□□□□□ -1.78
BRCA1-230ENST00000634433 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
BRCA1-230ENST00000634433 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
BRCA1-230ENST00000634433 TNXBP22105 4242 aa3.9□□□□□ -1.79
BRCA1-230ENST00000634433 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-230ENST00000634433 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
BRCA1-230ENST00000634433 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
BRCA1-230ENST00000634433 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
BRCA1-230ENST00000634433 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
BRCA1-230ENST00000634433 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
BRCA1-230ENST00000634433 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
BRCA1-230ENST00000634433 SPINK7P58062 85 aa3.81□□□□□ -1.8
BRCA1-230ENST00000634433 RPL37P61927 97 aaKnown RBP3.8□□□□□ -1.8
BRCA1-230ENST00000634433 XP32Q5T750 250 aa3.78□□□□□ -1.8
BRCA1-230ENST00000634433 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
BRCA1-230ENST00000634433 A0A1B0GU33 70 aa3.76□□□□□ -1.81
BRCA1-230ENST00000634433 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
BRCA1-230ENST00000634433 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
BRCA1-230ENST00000634433 A0A1B0GU69 56 aa3.74□□□□□ -1.81
BRCA1-230ENST00000634433 R4GN34 69 aa3.72□□□□□ -1.81
BRCA1-230ENST00000634433 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
BRCA1-230ENST00000634433 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
BRCA1-230ENST00000634433 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
BRCA1-230ENST00000634433 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
BRCA1-230ENST00000634433 UQCR11O14957 56 aa3.67□□□□□ -1.82
BRCA1-230ENST00000634433 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
BRCA1-230ENST00000634433 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
BRCA1-230ENST00000634433 S4R3F8 94 aa3.63□□□□□ -1.83
BRCA1-230ENST00000634433 H1FX-AS1Q4G0G2 97 aa3.63□□□□□ -1.83
BRCA1-230ENST00000634433 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
BRCA1-230ENST00000634433 LRP2P98164 4655 aa3.59□□□□□ -1.83
BRCA1-230ENST00000634433 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-230ENST00000634433 LPAP08519 4548 aa3.56□□□□□ -1.84
BRCA1-230ENST00000634433 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
BRCA1-230ENST00000634433 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
BRCA1-230ENST00000634433 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
BRCA1-230ENST00000634433 H0YAA0 97 aa3.51□□□□□ -1.85
BRCA1-230ENST00000634433 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-230ENST00000634433 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
BRCA1-230ENST00000634433 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.85
BRCA1-230ENST00000634433 M0QZ58 72 aa3.43□□□□□ -1.86
BRCA1-230ENST00000634433 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
BRCA1-230ENST00000634433 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
BRCA1-230ENST00000634433 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.86
BRCA1-230ENST00000634433 A0A0D9SG42 100 aa3.39□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
BRCA1-230ENST00000634433 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
BRCA1-230ENST00000634433 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
BRCA1-230ENST00000634433 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
BRCA1-230ENST00000634433 MUC2Q02817 5179 aa3.3□□□□□ -1.88
BRCA1-230ENST00000634433 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
BRCA1-230ENST00000634433 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
BRCA1-230ENST00000634433 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
BRCA1-230ENST00000634433 M0R2T5 61 aa3.24□□□□□ -1.89
BRCA1-230ENST00000634433 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
BRCA1-230ENST00000634433 MT1HP80294 61 aa3.21□□□□□ -1.9
BRCA1-230ENST00000634433 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
BRCA1-230ENST00000634433 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
BRCA1-230ENST00000634433 INE1O15225 51 aa3.13□□□□□ -1.91
BRCA1-230ENST00000634433 KRTAP10-10P60014 251 aa3.13□□□□□ -1.91
BRCA1-230ENST00000634433 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
BRCA1-230ENST00000634433 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
BRCA1-230ENST00000634433 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
BRCA1-230ENST00000634433 MT2AP02795 61 aa3.11□□□□□ -1.91
BRCA1-230ENST00000634433 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
BRCA1-230ENST00000634433 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
BRCA1-230ENST00000634433 MT1FP04733 61 aa3.09□□□□□ -1.91
BRCA1-230ENST00000634433 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
BRCA1-230ENST00000634433 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
BRCA1-230ENST00000634433 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
BRCA1-230ENST00000634433 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
BRCA1-230ENST00000634433 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
BRCA1-230ENST00000634433 TNP1P09430 55 aa3.04□□□□□ -1.92
BRCA1-230ENST00000634433 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
BRCA1-230ENST00000634433 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
BRCA1-230ENST00000634433 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
BRCA1-230ENST00000634433 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
BRCA1-230ENST00000634433 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms