RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
PHACTR4-206ENST00000632421 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
PHACTR4-206ENST00000632421 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
PHACTR4-206ENST00000632421 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
PHACTR4-206ENST00000632421 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
PHACTR4-206ENST00000632421 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
PHACTR4-206ENST00000632421 XP32Q5T750 250 aa6.43□□□□□ -1.38
PHACTR4-206ENST00000632421 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
PHACTR4-206ENST00000632421 MYCBP2O75592 4640 aa6.4□□□□□ -1.39
PHACTR4-206ENST00000632421 EPPK1P58107 5090 aaKnown RBP6.36□□□□□ -1.39
PHACTR4-206ENST00000632421 H0YAA0 97 aa6.34□□□□□ -1.39
PHACTR4-206ENST00000632421 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
PHACTR4-206ENST00000632421 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
PHACTR4-206ENST00000632421 ROMO1P60602 79 aa6.27□□□□□ -1.41
PHACTR4-206ENST00000632421 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
PHACTR4-206ENST00000632421 A0A1B0GU33 70 aa6.23□□□□□ -1.41
PHACTR4-206ENST00000632421 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
PHACTR4-206ENST00000632421 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
PHACTR4-206ENST00000632421 S4R3F8 94 aa6.21□□□□□ -1.42
PHACTR4-206ENST00000632421 P0C880 135 aa6.18□□□□□ -1.42
PHACTR4-206ENST00000632421 LRP2P98164 4655 aa6.16□□□□□ -1.42
PHACTR4-206ENST00000632421 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
PHACTR4-206ENST00000632421 LPAP08519 4548 aa6.12□□□□□ -1.43
PHACTR4-206ENST00000632421 J3QL48 77 aa6.11□□□□□ -1.43
PHACTR4-206ENST00000632421 A0A0D9SG42 100 aa6.1□□□□□ -1.43
PHACTR4-206ENST00000632421 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
PHACTR4-206ENST00000632421 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
PHACTR4-206ENST00000632421 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
PHACTR4-206ENST00000632421 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
PHACTR4-206ENST00000632421 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
PHACTR4-206ENST00000632421 K7ERS5 55 aa6.04□□□□□ -1.44
PHACTR4-206ENST00000632421 HERC2O95714 4834 aa6.03□□□□□ -1.44
PHACTR4-206ENST00000632421 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
PHACTR4-206ENST00000632421 BIRC6Q9NR09 4857 aa5.98□□□□□ -1.45
PHACTR4-206ENST00000632421 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
PHACTR4-206ENST00000632421 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
PHACTR4-206ENST00000632421 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
PHACTR4-206ENST00000632421 M0QZ58 72 aa5.85□□□□□ -1.47
PHACTR4-206ENST00000632421 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
PHACTR4-206ENST00000632421 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
PHACTR4-206ENST00000632421 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
PHACTR4-206ENST00000632421 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
PHACTR4-206ENST00000632421 R4GN34 69 aa5.75□□□□□ -1.49
PHACTR4-206ENST00000632421 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
PHACTR4-206ENST00000632421 HERC1Q15751 4861 aa5.71□□□□□ -1.5
PHACTR4-206ENST00000632421 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
PHACTR4-206ENST00000632421 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
PHACTR4-206ENST00000632421 MUC2Q02817 5179 aa5.67□□□□□ -1.5
PHACTR4-206ENST00000632421 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
PHACTR4-206ENST00000632421 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
PHACTR4-206ENST00000632421 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
PHACTR4-206ENST00000632421 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
PHACTR4-206ENST00000632421 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
PHACTR4-206ENST00000632421 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
PHACTR4-206ENST00000632421 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
PHACTR4-206ENST00000632421 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
PHACTR4-206ENST00000632421 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
PHACTR4-206ENST00000632421 M0R2T5 61 aa5.42□□□□□ -1.54
PHACTR4-206ENST00000632421 MT1HP80294 61 aa5.41□□□□□ -1.54
PHACTR4-206ENST00000632421 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
PHACTR4-206ENST00000632421 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
PHACTR4-206ENST00000632421 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
PHACTR4-206ENST00000632421 MT2AP02795 61 aa5.28□□□□□ -1.56
PHACTR4-206ENST00000632421 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
PHACTR4-206ENST00000632421 MT1FP04733 61 aa5.27□□□□□ -1.57
PHACTR4-206ENST00000632421 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
PHACTR4-206ENST00000632421 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
PHACTR4-206ENST00000632421 TNP1P09430 55 aa5.21□□□□□ -1.58
PHACTR4-206ENST00000632421 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
PHACTR4-206ENST00000632421 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
PHACTR4-206ENST00000632421 MT1BP07438 61 aa5.05□□□□□ -1.6
PHACTR4-206ENST00000632421 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
PHACTR4-206ENST00000632421 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
PHACTR4-206ENST00000632421 MT1XP80297 61 aa4.97□□□□□ -1.61
PHACTR4-206ENST00000632421 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
PHACTR4-206ENST00000632421 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
PHACTR4-206ENST00000632421 LCE2BO14633 110 aa4.86□□□□□ -1.63
PHACTR4-206ENST00000632421 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
PHACTR4-206ENST00000632421 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
PHACTR4-206ENST00000632421 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
PHACTR4-206ENST00000632421 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
PHACTR4-206ENST00000632421 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
PHACTR4-206ENST00000632421 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
PHACTR4-206ENST00000632421 USH2AO75445 5202 aa4.68□□□□□ -1.66
PHACTR4-206ENST00000632421 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.68
PHACTR4-206ENST00000632421 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
PHACTR4-206ENST00000632421 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
PHACTR4-206ENST00000632421 KMT2DO14686 5537 aa4.51□□□□□ -1.69
PHACTR4-206ENST00000632421 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
PHACTR4-206ENST00000632421 INE1O15225 51 aa4.48□□□□□ -1.69
PHACTR4-206ENST00000632421 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
PHACTR4-206ENST00000632421 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PHACTR4-206ENST00000632421 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
PHACTR4-206ENST00000632421 MT1EP04732 61 aa4.33□□□□□ -1.72
PHACTR4-206ENST00000632421 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
PHACTR4-206ENST00000632421 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
PHACTR4-206ENST00000632421 MT1LQ93083 61 aa4.3□□□□□ -1.72
PHACTR4-206ENST00000632421 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PHACTR4-206ENST00000632421 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
PHACTR4-206ENST00000632421 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms