RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 SPRR1BP22528 89 aa3.04□□□□□ -1.92
TCF4-268ENST00000629387 RYR2Q92736 4967 aa3.03□□□□□ -1.92
TCF4-268ENST00000629387 MEGF8Q7Z7M0 2845 aa3.03□□□□□ -1.92
TCF4-268ENST00000629387 S4R3F8 94 aa3.02□□□□□ -1.93
TCF4-268ENST00000629387 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
TCF4-268ENST00000629387 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
TCF4-268ENST00000629387 LCE3BQ5TA77 95 aa3□□□□□ -1.93
TCF4-268ENST00000629387 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
TCF4-268ENST00000629387 HECTD4Q9Y4D8 3996 aa2.99□□□□□ -1.93
TCF4-268ENST00000629387 Q5VSD8 79 aa2.99□□□□□ -1.93
TCF4-268ENST00000629387 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
TCF4-268ENST00000629387 LYSTQ99698 3801 aa2.97□□□□□ -1.93
TCF4-268ENST00000629387 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
TCF4-268ENST00000629387 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
TCF4-268ENST00000629387 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
TCF4-268ENST00000629387 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
TCF4-268ENST00000629387 COL7A1Q02388 2944 aa2.95□□□□□ -1.94
TCF4-268ENST00000629387 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
TCF4-268ENST00000629387 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
TCF4-268ENST00000629387 RYR1P21817 5038 aa2.93□□□□□ -1.94
TCF4-268ENST00000629387 CSMD3Q7Z407 3707 aa2.92□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
TCF4-268ENST00000629387 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
TCF4-268ENST00000629387 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.94
TCF4-268ENST00000629387 KMT2AQ03164 3969 aa2.9□□□□□ -1.95
TCF4-268ENST00000629387 DNAH9Q9NYC9 4486 aa2.88□□□□□ -1.95
TCF4-268ENST00000629387 DNAH10Q8IVF4 4471 aa2.88□□□□□ -1.95
TCF4-268ENST00000629387 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
TCF4-268ENST00000629387 DNAH17Q9UFH2 4485 aa2.84□□□□□ -1.95
TCF4-268ENST00000629387 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.96
TCF4-268ENST00000629387 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
TCF4-268ENST00000629387 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
TCF4-268ENST00000629387 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
TCF4-268ENST00000629387 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
TCF4-268ENST00000629387 STARD9Q9P2P6 4700 aa2.81□□□□□ -1.96
TCF4-268ENST00000629387 SACSQ9NZJ4 4579 aa2.81□□□□□ -1.96
TCF4-268ENST00000629387 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
TCF4-268ENST00000629387 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
TCF4-268ENST00000629387 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
TCF4-268ENST00000629387 M0R2T5 61 aa2.79□□□□□ -1.96
TCF4-268ENST00000629387 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
TCF4-268ENST00000629387 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
TCF4-268ENST00000629387 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
TCF4-268ENST00000629387 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
TCF4-268ENST00000629387 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
TCF4-268ENST00000629387 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
TCF4-268ENST00000629387 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
TCF4-268ENST00000629387 KRTAP10-6P60371 365 aaPredicted RBP2.73□□□□□ -1.97
TCF4-268ENST00000629387 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
TCF4-268ENST00000629387 PKD1P98161 4303 aa2.69□□□□□ -1.98
TCF4-268ENST00000629387 DNAH11Q96DT5 4516 aa2.69□□□□□ -1.98
TCF4-268ENST00000629387 HERC1Q15751 4861 aa2.69□□□□□ -1.98
TCF4-268ENST00000629387 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
TCF4-268ENST00000629387 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
TCF4-268ENST00000629387 FAT2Q9NYQ8 4349 aa2.68□□□□□ -1.98
TCF4-268ENST00000629387 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
TCF4-268ENST00000629387 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
TCF4-268ENST00000629387 M0QZ58 72 aa2.66□□□□□ -1.98
TCF4-268ENST00000629387 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.98
TCF4-268ENST00000629387 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
TCF4-268ENST00000629387 MUC2Q02817 5179 aa2.63□□□□□ -1.99
TCF4-268ENST00000629387 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
TCF4-268ENST00000629387 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
TCF4-268ENST00000629387 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
TCF4-268ENST00000629387 KRTAP4-5Q9BYR2 181 aa2.61□□□□□ -1.99
TCF4-268ENST00000629387 LRP1BQ9NZR2 4599 aa2.61□□□□□ -1.99
TCF4-268ENST00000629387 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
TCF4-268ENST00000629387 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
TCF4-268ENST00000629387 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
TCF4-268ENST00000629387 DYNC1H1Q14204 4646 aaKnown RBP2.57□□□□□ -2
TCF4-268ENST00000629387 KRTAP10-4P60372 401 aaPredicted RBP2.57□□□□□ -2
TCF4-268ENST00000629387 LCE1FQ5T754 118 aa2.57□□□□□ -2
TCF4-268ENST00000629387 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TCF4-268ENST00000629387 FAT3Q8TDW7 4589 aa2.56□□□□□ -2
TCF4-268ENST00000629387 MT1HL1P0DM35 61 aa2.56□□□□□ -2
TCF4-268ENST00000629387 HSPG2P98160 4391 aa2.55□□□□□ -2
TCF4-268ENST00000629387 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
TCF4-268ENST00000629387 FAT1Q14517 4588 aa2.53□□□□□ -2
TCF4-268ENST00000629387 TNXBP22105 4242 aa2.53□□□□□ -2
TCF4-268ENST00000629387 HMCN2Q8NDA2 5059 aa2.52□□□□□ -2.01
TCF4-268ENST00000629387 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
TCF4-268ENST00000629387 TNP1P09430 55 aa2.51□□□□□ -2.01
TCF4-268ENST00000629387 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
TCF4-268ENST00000629387 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
TCF4-268ENST00000629387 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
TCF4-268ENST00000629387 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
TCF4-268ENST00000629387 LRP1Q07954 4544 aaKnown RBP2.41□□□□□ -2.02
TCF4-268ENST00000629387 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
TCF4-268ENST00000629387 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
TCF4-268ENST00000629387 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
TCF4-268ENST00000629387 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
TCF4-268ENST00000629387 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
TCF4-268ENST00000629387 LPAP08519 4548 aa2.31□□□□□ -2.04
TCF4-268ENST00000629387 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
TCF4-268ENST00000629387 LRP2P98164 4655 aa2.26□□□□□ -2.05
TCF4-268ENST00000629387 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms