RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
PTBP1-220ENST00000627714 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
PTBP1-220ENST00000627714 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
PTBP1-220ENST00000627714 S4R3F8 94 aa9.81□□□□□ -0.84
PTBP1-220ENST00000627714 HSPG2P98160 4391 aa9.79□□□□□ -0.84
PTBP1-220ENST00000627714 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
PTBP1-220ENST00000627714 KRTAP25-1Q3LHN0 102 aa9.75□□□□□ -0.85
PTBP1-220ENST00000627714 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.85
PTBP1-220ENST00000627714 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
PTBP1-220ENST00000627714 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
PTBP1-220ENST00000627714 RYR1P21817 5038 aa9.67□□□□□ -0.86
PTBP1-220ENST00000627714 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
PTBP1-220ENST00000627714 ROMO1P60602 79 aa9.62□□□□□ -0.87
PTBP1-220ENST00000627714 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
PTBP1-220ENST00000627714 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
PTBP1-220ENST00000627714 MYCBP2O75592 4640 aa9.56□□□□□ -0.88
PTBP1-220ENST00000627714 A0A0D9SG42 100 aa9.56□□□□□ -0.88
PTBP1-220ENST00000627714 P0C880 135 aa9.55□□□□□ -0.88
PTBP1-220ENST00000627714 RYR3Q15413 4870 aa9.5□□□□□ -0.89
PTBP1-220ENST00000627714 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
PTBP1-220ENST00000627714 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
PTBP1-220ENST00000627714 M0QZ58 72 aa9.39□□□□□ -0.91
PTBP1-220ENST00000627714 KRTAP12-2P59991 146 aa9.35□□□□□ -0.91
PTBP1-220ENST00000627714 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
PTBP1-220ENST00000627714 LRP2P98164 4655 aa9.3□□□□□ -0.92
PTBP1-220ENST00000627714 LPAP08519 4548 aa9.28□□□□□ -0.92
PTBP1-220ENST00000627714 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
PTBP1-220ENST00000627714 J3QL48 77 aa9.22□□□□□ -0.93
PTBP1-220ENST00000627714 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
PTBP1-220ENST00000627714 BIRC6Q9NR09 4857 aa9.22□□□□□ -0.93
PTBP1-220ENST00000627714 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
PTBP1-220ENST00000627714 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
PTBP1-220ENST00000627714 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
PTBP1-220ENST00000627714 R4GN34 69 aa9.1□□□□□ -0.95
PTBP1-220ENST00000627714 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
PTBP1-220ENST00000627714 H3BS24 57 aa9.02□□□□□ -0.97
PTBP1-220ENST00000627714 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
PTBP1-220ENST00000627714 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
PTBP1-220ENST00000627714 A0A0A0MQY5 61 aa8.88□□□□□ -0.99
PTBP1-220ENST00000627714 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
PTBP1-220ENST00000627714 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
PTBP1-220ENST00000627714 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
PTBP1-220ENST00000627714 HERC2O95714 4834 aa8.78□□□□□ -1
PTBP1-220ENST00000627714 PCLOQ9Y6V0 5065 aa8.77□□□□□ -1
PTBP1-220ENST00000627714 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
PTBP1-220ENST00000627714 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
PTBP1-220ENST00000627714 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
PTBP1-220ENST00000627714 FLGP20930 4061 aaPredicted RBP8.58□□□□□ -1.04
PTBP1-220ENST00000627714 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
PTBP1-220ENST00000627714 MUC2Q02817 5179 aa8.41□□□□□ -1.06
PTBP1-220ENST00000627714 HERC1Q15751 4861 aa8.4□□□□□ -1.07
PTBP1-220ENST00000627714 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
PTBP1-220ENST00000627714 TNP1P09430 55 aa8.35□□□□□ -1.07
PTBP1-220ENST00000627714 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
PTBP1-220ENST00000627714 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
PTBP1-220ENST00000627714 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
PTBP1-220ENST00000627714 LUZP6Q538Z0 58 aa8.17□□□□□ -1.1
PTBP1-220ENST00000627714 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
PTBP1-220ENST00000627714 M0R2T5 61 aa8.12□□□□□ -1.11
PTBP1-220ENST00000627714 MT1HP80294 61 aa8.08□□□□□ -1.12
PTBP1-220ENST00000627714 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
PTBP1-220ENST00000627714 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
PTBP1-220ENST00000627714 MT2AP02795 61 aa7.97□□□□□ -1.13
PTBP1-220ENST00000627714 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.13
PTBP1-220ENST00000627714 KRTAP10-10P60014 251 aa7.96□□□□□ -1.14
PTBP1-220ENST00000627714 MT1FP04733 61 aa7.95□□□□□ -1.14
PTBP1-220ENST00000627714 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
PTBP1-220ENST00000627714 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
PTBP1-220ENST00000627714 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
PTBP1-220ENST00000627714 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
PTBP1-220ENST00000627714 MT1BP07438 61 aa7.71□□□□□ -1.17
PTBP1-220ENST00000627714 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.17
PTBP1-220ENST00000627714 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
PTBP1-220ENST00000627714 MT1XP80297 61 aa7.67□□□□□ -1.18
PTBP1-220ENST00000627714 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
PTBP1-220ENST00000627714 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
PTBP1-220ENST00000627714 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
PTBP1-220ENST00000627714 PRO2289Q9P1D8 64 aa7.5□□□□□ -1.21
PTBP1-220ENST00000627714 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
PTBP1-220ENST00000627714 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
PTBP1-220ENST00000627714 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
PTBP1-220ENST00000627714 LCE2BO14633 110 aa7.23□□□□□ -1.25
PTBP1-220ENST00000627714 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
PTBP1-220ENST00000627714 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
PTBP1-220ENST00000627714 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
PTBP1-220ENST00000627714 INE1O15225 51 aa7.08□□□□□ -1.28
PTBP1-220ENST00000627714 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
PTBP1-220ENST00000627714 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
PTBP1-220ENST00000627714 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
PTBP1-220ENST00000627714 USH2AO75445 5202 aa6.89□□□□□ -1.31
PTBP1-220ENST00000627714 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
PTBP1-220ENST00000627714 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
PTBP1-220ENST00000627714 KMT2DO14686 5537 aa6.79□□□□□ -1.32
PTBP1-220ENST00000627714 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
PTBP1-220ENST00000627714 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
PTBP1-220ENST00000627714 KRTAP9-6A8MVA2 160 aa6.72□□□□□ -1.33
PTBP1-220ENST00000627714 MT1EP04732 61 aa6.65□□□□□ -1.34
PTBP1-220ENST00000627714 MT1LQ93083 61 aa6.65□□□□□ -1.34
PTBP1-220ENST00000627714 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
PTBP1-220ENST00000627714 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms