RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 WFDC13Q8IUB5 93 aa3.17□□□□□ -1.9
TCF4-249ENST00000625716 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
TCF4-249ENST00000625716 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
TCF4-249ENST00000625716 CXCL6P80162 114 aa3.15□□□□□ -1.91
TCF4-249ENST00000625716 ATP5EP2Q5VTU8 51 aa3.15□□□□□ -1.91
TCF4-249ENST00000625716 Q8N9L7 120 aa3.15□□□□□ -1.91
TCF4-249ENST00000625716 HCG22E2RYF7 251 aa3.14□□□□□ -1.91
TCF4-249ENST00000625716 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
TCF4-249ENST00000625716 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
TCF4-249ENST00000625716 LINC00643Q86TS7 51 aa3.12□□□□□ -1.91
TCF4-249ENST00000625716 K7ERU9 68 aa3.11□□□□□ -1.91
TCF4-249ENST00000625716 MT2AP02795 61 aa3.11□□□□□ -1.91
TCF4-249ENST00000625716 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
TCF4-249ENST00000625716 Q5W150 140 aa3.11□□□□□ -1.91
TCF4-249ENST00000625716 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
TCF4-249ENST00000625716 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
TCF4-249ENST00000625716 PCP4P48539 62 aa3.09□□□□□ -1.91
TCF4-249ENST00000625716 MT1FP04733 61 aa3.08□□□□□ -1.92
TCF4-249ENST00000625716 TP53AIP1Q9HCN2 124 aa3.08□□□□□ -1.92
TCF4-249ENST00000625716 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
TCF4-249ENST00000625716 IMUPQ9GZP8 106 aa3.05□□□□□ -1.92
TCF4-249ENST00000625716 HIST1H4AP62805 103 aaKnown RBP3.04□□□□□ -1.92
TCF4-249ENST00000625716 C1orf64Q8NEQ6 169 aa3.03□□□□□ -1.92
TCF4-249ENST00000625716 S4R3F8 94 aa3.02□□□□□ -1.93
TCF4-249ENST00000625716 C5orf47Q569G3 176 aa3.01□□□□□ -1.93
TCF4-249ENST00000625716 TRAV22A0A0B4J277 110 aa3□□□□□ -1.93
TCF4-249ENST00000625716 UQCRQO14949 82 aa3□□□□□ -1.93
TCF4-249ENST00000625716 CSAG1Q6PB30 78 aa3□□□□□ -1.93
TCF4-249ENST00000625716 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
TCF4-249ENST00000625716 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
TCF4-249ENST00000625716 LOC101927531A0A1B0GV80 90 aa2.99□□□□□ -1.93
TCF4-249ENST00000625716 ATOX1O00244 68 aa2.99□□□□□ -1.93
TCF4-249ENST00000625716 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
TCF4-249ENST00000625716 SMIM20Q8N5G0 67 aa2.98□□□□□ -1.93
TCF4-249ENST00000625716 A0A087WVE0 104 aa2.97□□□□□ -1.93
TCF4-249ENST00000625716 MT-ATP8P03928 68 aa2.97□□□□□ -1.93
TCF4-249ENST00000625716 SCGB1A1P11684 91 aa2.97□□□□□ -1.93
TCF4-249ENST00000625716 LCA10Q71F78 164 aa2.97□□□□□ -1.93
TCF4-249ENST00000625716 USH2AO75445 5202 aa2.97□□□□□ -1.93
TCF4-249ENST00000625716 H0Y9P7 68 aa2.96□□□□□ -1.94
TCF4-249ENST00000625716 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
TCF4-249ENST00000625716 H3BPC8 53 aa2.95□□□□□ -1.94
TCF4-249ENST00000625716 MP68P56378 58 aa2.94□□□□□ -1.94
TCF4-249ENST00000625716 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
TCF4-249ENST00000625716 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
TCF4-249ENST00000625716 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
TCF4-249ENST00000625716 NDUFC1O43677 76 aa2.92□□□□□ -1.94
TCF4-249ENST00000625716 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
TCF4-249ENST00000625716 A8MUN3 132 aa2.9□□□□□ -1.95
TCF4-249ENST00000625716 KLKP1Q107X0 134 aa2.9□□□□□ -1.95
TCF4-249ENST00000625716 Q5VV11 94 aa2.89□□□□□ -1.95
TCF4-249ENST00000625716 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
TCF4-249ENST00000625716 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
TCF4-249ENST00000625716 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
TCF4-249ENST00000625716 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
TCF4-249ENST00000625716 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
TCF4-249ENST00000625716 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
TCF4-249ENST00000625716 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
TCF4-249ENST00000625716 A6NN06 94 aa2.84□□□□□ -1.95
TCF4-249ENST00000625716 H0YAA0 97 aa2.84□□□□□ -1.95
TCF4-249ENST00000625716 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
TCF4-249ENST00000625716 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
TCF4-249ENST00000625716 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
TCF4-249ENST00000625716 MT1BP07438 61 aa2.82□□□□□ -1.96
TCF4-249ENST00000625716 COX7CP15954 63 aa2.82□□□□□ -1.96
TCF4-249ENST00000625716 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
TCF4-249ENST00000625716 C20orf197Q8N268 126 aa2.81□□□□□ -1.96
TCF4-249ENST00000625716 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
TCF4-249ENST00000625716 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
TCF4-249ENST00000625716 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
TCF4-249ENST00000625716 ACYP2P14621 99 aa2.78□□□□□ -1.96
TCF4-249ENST00000625716 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
TCF4-249ENST00000625716 SNURFQ9Y675 71 aa2.78□□□□□ -1.96
TCF4-249ENST00000625716 R4GN34 69 aa2.78□□□□□ -1.96
TCF4-249ENST00000625716 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
TCF4-249ENST00000625716 SPTSSBQ8NFR3 76 aa2.77□□□□□ -1.97
TCF4-249ENST00000625716 PLAC4Q8WY50 150 aa2.77□□□□□ -1.97
TCF4-249ENST00000625716 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
TCF4-249ENST00000625716 M0QZ58 72 aa2.75□□□□□ -1.97
TCF4-249ENST00000625716 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
TCF4-249ENST00000625716 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
TCF4-249ENST00000625716 P0C880 135 aa2.74□□□□□ -1.97
TCF4-249ENST00000625716 H7BZZ5 65 aa2.73□□□□□ -1.97
TCF4-249ENST00000625716 ATP5EP56381 51 aaPredicted RBP2.72□□□□□ -1.97
TCF4-249ENST00000625716 LINC01554Q52M75 96 aa2.72□□□□□ -1.97
TCF4-249ENST00000625716 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TCF4-249ENST00000625716 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
TCF4-249ENST00000625716 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
TCF4-249ENST00000625716 TMEM258P61165 79 aa2.68□□□□□ -1.98
TCF4-249ENST00000625716 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
TCF4-249ENST00000625716 COA5Q86WW8 74 aa2.67□□□□□ -1.98
TCF4-249ENST00000625716 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
TCF4-249ENST00000625716 MT1XP80297 61 aa2.66□□□□□ -1.98
TCF4-249ENST00000625716 SEC61GP60059 68 aa2.63□□□□□ -1.99
TCF4-249ENST00000625716 NEBP20929 6669 aa2.62□□□□□ -1.99
TCF4-249ENST00000625716 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
TCF4-249ENST00000625716 SERP1Q9Y6X1 66 aa2.61□□□□□ -1.99
TCF4-249ENST00000625716 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
TCF4-249ENST00000625716 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
TCF4-249ENST00000625716 PRAC1Q96KF2 57 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms