RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
SPTAN1-210ENST00000625282 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
SPTAN1-210ENST00000625282 DNAH5Q8TE73 4624 aa4.57□□□□□ -1.68
SPTAN1-210ENST00000625282 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
SPTAN1-210ENST00000625282 XP32Q5T750 250 aa4.55□□□□□ -1.68
SPTAN1-210ENST00000625282 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SPTAN1-210ENST00000625282 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
SPTAN1-210ENST00000625282 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
SPTAN1-210ENST00000625282 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
SPTAN1-210ENST00000625282 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
SPTAN1-210ENST00000625282 SACSQ9NZJ4 4579 aa4.51□□□□□ -1.69
SPTAN1-210ENST00000625282 RYR2Q92736 4967 aa4.5□□□□□ -1.69
SPTAN1-210ENST00000625282 RYR3Q15413 4870 aa4.5□□□□□ -1.69
SPTAN1-210ENST00000625282 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
SPTAN1-210ENST00000625282 FAT1Q14517 4588 aa4.5□□□□□ -1.69
SPTAN1-210ENST00000625282 DYNC1H1Q14204 4646 aaKnown RBP4.5□□□□□ -1.69
SPTAN1-210ENST00000625282 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
SPTAN1-210ENST00000625282 DYNC2H1Q8NCM8 4307 aaKnown RBP4.49□□□□□ -1.69
SPTAN1-210ENST00000625282 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
SPTAN1-210ENST00000625282 M0QZ58 72 aa4.48□□□□□ -1.69
SPTAN1-210ENST00000625282 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
SPTAN1-210ENST00000625282 R4GN34 69 aa4.45□□□□□ -1.7
SPTAN1-210ENST00000625282 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
SPTAN1-210ENST00000625282 M0R2T5 61 aa4.43□□□□□ -1.7
SPTAN1-210ENST00000625282 EPPK1P58107 5090 aaKnown RBP4.42□□□□□ -1.7
SPTAN1-210ENST00000625282 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.7
SPTAN1-210ENST00000625282 RYR1P21817 5038 aa4.4□□□□□ -1.71
SPTAN1-210ENST00000625282 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
SPTAN1-210ENST00000625282 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
SPTAN1-210ENST00000625282 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
SPTAN1-210ENST00000625282 PKHD1P08F94 4074 aa4.36□□□□□ -1.71
SPTAN1-210ENST00000625282 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
SPTAN1-210ENST00000625282 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
SPTAN1-210ENST00000625282 HERC2O95714 4834 aa4.31□□□□□ -1.72
SPTAN1-210ENST00000625282 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
SPTAN1-210ENST00000625282 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
SPTAN1-210ENST00000625282 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
SPTAN1-210ENST00000625282 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
SPTAN1-210ENST00000625282 PKD1P98161 4303 aa4.21□□□□□ -1.74
SPTAN1-210ENST00000625282 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
SPTAN1-210ENST00000625282 HSPG2P98160 4391 aa4.17□□□□□ -1.74
SPTAN1-210ENST00000625282 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
SPTAN1-210ENST00000625282 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
SPTAN1-210ENST00000625282 TNP1P09430 55 aa4.12□□□□□ -1.75
SPTAN1-210ENST00000625282 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
SPTAN1-210ENST00000625282 PCLOQ9Y6V0 5065 aa4.11□□□□□ -1.75
SPTAN1-210ENST00000625282 HERC1Q15751 4861 aa4.05□□□□□ -1.76
SPTAN1-210ENST00000625282 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
SPTAN1-210ENST00000625282 LRP2P98164 4655 aa4□□□□□ -1.77
SPTAN1-210ENST00000625282 KRTAP4-1Q9BYQ7 146 aa3.97□□□□□ -1.77
SPTAN1-210ENST00000625282 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
SPTAN1-210ENST00000625282 INE1O15225 51 aa3.96□□□□□ -1.78
SPTAN1-210ENST00000625282 LPAP08519 4548 aa3.94□□□□□ -1.78
SPTAN1-210ENST00000625282 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
SPTAN1-210ENST00000625282 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
SPTAN1-210ENST00000625282 TNXBP22105 4242 aa3.87□□□□□ -1.79
SPTAN1-210ENST00000625282 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
SPTAN1-210ENST00000625282 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
SPTAN1-210ENST00000625282 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
SPTAN1-210ENST00000625282 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
SPTAN1-210ENST00000625282 MT1HP80294 61 aa3.74□□□□□ -1.81
SPTAN1-210ENST00000625282 MUC2Q02817 5179 aa3.71□□□□□ -1.82
SPTAN1-210ENST00000625282 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
SPTAN1-210ENST00000625282 MT2AP02795 61 aa3.63□□□□□ -1.83
SPTAN1-210ENST00000625282 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
SPTAN1-210ENST00000625282 MT1FP04733 61 aa3.6□□□□□ -1.83
SPTAN1-210ENST00000625282 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
SPTAN1-210ENST00000625282 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SPTAN1-210ENST00000625282 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
SPTAN1-210ENST00000625282 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
SPTAN1-210ENST00000625282 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
SPTAN1-210ENST00000625282 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
SPTAN1-210ENST00000625282 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
SPTAN1-210ENST00000625282 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
SPTAN1-210ENST00000625282 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
SPTAN1-210ENST00000625282 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
SPTAN1-210ENST00000625282 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
SPTAN1-210ENST00000625282 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
SPTAN1-210ENST00000625282 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
SPTAN1-210ENST00000625282 KRTAP9-3Q9BYQ3 159 aa3.36□□□□□ -1.87
SPTAN1-210ENST00000625282 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
SPTAN1-210ENST00000625282 MT1BP07438 61 aa3.33□□□□□ -1.88
SPTAN1-210ENST00000625282 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SPTAN1-210ENST00000625282 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
SPTAN1-210ENST00000625282 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
SPTAN1-210ENST00000625282 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
SPTAN1-210ENST00000625282 LCE2BO14633 110 aa3.3□□□□□ -1.88
SPTAN1-210ENST00000625282 MT1XP80297 61 aa3.29□□□□□ -1.88
SPTAN1-210ENST00000625282 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
SPTAN1-210ENST00000625282 LCE2DQ5TA82 110 aaPredicted RBP3.23□□□□□ -1.89
SPTAN1-210ENST00000625282 USH2AO75445 5202 aa3.23□□□□□ -1.89
SPTAN1-210ENST00000625282 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SPTAN1-210ENST00000625282 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP4-8Q9BYQ9 185 aa3.15□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
SPTAN1-210ENST00000625282 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
SPTAN1-210ENST00000625282 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms