RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
SND1-IT1-201ENST00000623342 Q5VSD8 79 aa4.46□□□□□ -1.7
SND1-IT1-201ENST00000623342 LPAP08519 4548 aa4.45□□□□□ -1.7
SND1-IT1-201ENST00000623342 A6NN06 94 aa4.45□□□□□ -1.7
SND1-IT1-201ENST00000623342 UQCR11O14957 56 aa4.43□□□□□ -1.7
SND1-IT1-201ENST00000623342 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
SND1-IT1-201ENST00000623342 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
SND1-IT1-201ENST00000623342 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
SND1-IT1-201ENST00000623342 SEC61GP60059 68 aa4.41□□□□□ -1.7
SND1-IT1-201ENST00000623342 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
SND1-IT1-201ENST00000623342 LRP2P98164 4655 aa4.41□□□□□ -1.7
SND1-IT1-201ENST00000623342 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
SND1-IT1-201ENST00000623342 HERC2O95714 4834 aa4.39□□□□□ -1.71
SND1-IT1-201ENST00000623342 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
SND1-IT1-201ENST00000623342 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
SND1-IT1-201ENST00000623342 XP32Q5T750 250 aa4.34□□□□□ -1.71
SND1-IT1-201ENST00000623342 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
SND1-IT1-201ENST00000623342 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
SND1-IT1-201ENST00000623342 HERC1Q15751 4861 aa4.32□□□□□ -1.72
SND1-IT1-201ENST00000623342 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
SND1-IT1-201ENST00000623342 A0A1B0GU33 70 aa4.3□□□□□ -1.72
SND1-IT1-201ENST00000623342 H0YAA0 97 aa4.29□□□□□ -1.72
SND1-IT1-201ENST00000623342 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
SND1-IT1-201ENST00000623342 MUC2Q02817 5179 aa4.27□□□□□ -1.73
SND1-IT1-201ENST00000623342 RBM12B-AS1Q9P1G2 102 aa4.26□□□□□ -1.73
SND1-IT1-201ENST00000623342 S4R3F8 94 aa4.23□□□□□ -1.73
SND1-IT1-201ENST00000623342 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
SND1-IT1-201ENST00000623342 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
SND1-IT1-201ENST00000623342 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SND1-IT1-201ENST00000623342 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
SND1-IT1-201ENST00000623342 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
SND1-IT1-201ENST00000623342 K7ERS5 55 aa4.15□□□□□ -1.74
SND1-IT1-201ENST00000623342 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
SND1-IT1-201ENST00000623342 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
SND1-IT1-201ENST00000623342 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
SND1-IT1-201ENST00000623342 P0C880 135 aa4.11□□□□□ -1.75
SND1-IT1-201ENST00000623342 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
SND1-IT1-201ENST00000623342 A0A0D9SG42 100 aa4.09□□□□□ -1.76
SND1-IT1-201ENST00000623342 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
SND1-IT1-201ENST00000623342 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
SND1-IT1-201ENST00000623342 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
SND1-IT1-201ENST00000623342 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
SND1-IT1-201ENST00000623342 H3BS24 57 aa4.04□□□□□ -1.76
SND1-IT1-201ENST00000623342 ROMO1P60602 79 aa4.03□□□□□ -1.76
SND1-IT1-201ENST00000623342 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
SND1-IT1-201ENST00000623342 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
SND1-IT1-201ENST00000623342 M0QZ58 72 aa4.01□□□□□ -1.77
SND1-IT1-201ENST00000623342 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
SND1-IT1-201ENST00000623342 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
SND1-IT1-201ENST00000623342 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
SND1-IT1-201ENST00000623342 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
SND1-IT1-201ENST00000623342 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
SND1-IT1-201ENST00000623342 R4GN34 69 aa3.92□□□□□ -1.78
SND1-IT1-201ENST00000623342 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
SND1-IT1-201ENST00000623342 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
SND1-IT1-201ENST00000623342 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
SND1-IT1-201ENST00000623342 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
SND1-IT1-201ENST00000623342 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
SND1-IT1-201ENST00000623342 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
SND1-IT1-201ENST00000623342 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SND1-IT1-201ENST00000623342 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
SND1-IT1-201ENST00000623342 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SND1-IT1-201ENST00000623342 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
SND1-IT1-201ENST00000623342 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
SND1-IT1-201ENST00000623342 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
SND1-IT1-201ENST00000623342 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.82
SND1-IT1-201ENST00000623342 M0R2T5 61 aa3.63□□□□□ -1.83
SND1-IT1-201ENST00000623342 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
SND1-IT1-201ENST00000623342 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
SND1-IT1-201ENST00000623342 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
SND1-IT1-201ENST00000623342 MT1HP80294 61 aa3.62□□□□□ -1.83
SND1-IT1-201ENST00000623342 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
SND1-IT1-201ENST00000623342 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
SND1-IT1-201ENST00000623342 USH2AO75445 5202 aa3.58□□□□□ -1.84
SND1-IT1-201ENST00000623342 TNP1P09430 55 aa3.57□□□□□ -1.84
SND1-IT1-201ENST00000623342 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
SND1-IT1-201ENST00000623342 MT2AP02795 61 aa3.54□□□□□ -1.84
SND1-IT1-201ENST00000623342 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
SND1-IT1-201ENST00000623342 MT1FP04733 61 aa3.53□□□□□ -1.84
SND1-IT1-201ENST00000623342 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
SND1-IT1-201ENST00000623342 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
SND1-IT1-201ENST00000623342 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SND1-IT1-201ENST00000623342 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
SND1-IT1-201ENST00000623342 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
SND1-IT1-201ENST00000623342 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.85
SND1-IT1-201ENST00000623342 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
SND1-IT1-201ENST00000623342 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
SND1-IT1-201ENST00000623342 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
SND1-IT1-201ENST00000623342 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
SND1-IT1-201ENST00000623342 MT1BP07438 61 aa3.41□□□□□ -1.86
SND1-IT1-201ENST00000623342 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
SND1-IT1-201ENST00000623342 KMT2DO14686 5537 aa3.38□□□□□ -1.87
SND1-IT1-201ENST00000623342 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
SND1-IT1-201ENST00000623342 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
SND1-IT1-201ENST00000623342 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
SND1-IT1-201ENST00000623342 MT1XP80297 61 aa3.36□□□□□ -1.87
SND1-IT1-201ENST00000623342 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
SND1-IT1-201ENST00000623342 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
SND1-IT1-201ENST00000623342 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
SND1-IT1-201ENST00000623342 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms