RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
LITAF-221ENST00000622633 FAT1Q14517 4588 aa6.67□□□□□ -1.34
LITAF-221ENST00000622633 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
LITAF-221ENST00000622633 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
LITAF-221ENST00000622633 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
LITAF-221ENST00000622633 KMT2CQ8NEZ4 4911 aaKnown RBP6.58□□□□□ -1.36
LITAF-221ENST00000622633 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
LITAF-221ENST00000622633 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
LITAF-221ENST00000622633 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
LITAF-221ENST00000622633 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
LITAF-221ENST00000622633 KRTAP21-3Q3LHN1 58 aa6.55□□□□□ -1.36
LITAF-221ENST00000622633 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
LITAF-221ENST00000622633 RYR2Q92736 4967 aa6.52□□□□□ -1.37
LITAF-221ENST00000622633 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
LITAF-221ENST00000622633 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
LITAF-221ENST00000622633 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
LITAF-221ENST00000622633 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.39
LITAF-221ENST00000622633 RYR3Q15413 4870 aa6.4□□□□□ -1.39
LITAF-221ENST00000622633 A0A0D9SG42 100 aa6.39□□□□□ -1.39
LITAF-221ENST00000622633 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
LITAF-221ENST00000622633 TNXBP22105 4242 aa6.34□□□□□ -1.39
LITAF-221ENST00000622633 HSPG2P98160 4391 aa6.32□□□□□ -1.4
LITAF-221ENST00000622633 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
LITAF-221ENST00000622633 XP32Q5T750 250 aa6.3□□□□□ -1.4
LITAF-221ENST00000622633 LCE2BO14633 110 aa6.3□□□□□ -1.4
LITAF-221ENST00000622633 Q5VSD8 79 aa6.3□□□□□ -1.4
LITAF-221ENST00000622633 S4R3F8 94 aa6.29□□□□□ -1.4
LITAF-221ENST00000622633 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
LITAF-221ENST00000622633 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
LITAF-221ENST00000622633 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
LITAF-221ENST00000622633 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
LITAF-221ENST00000622633 RYR1P21817 5038 aa6.19□□□□□ -1.42
LITAF-221ENST00000622633 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
LITAF-221ENST00000622633 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
LITAF-221ENST00000622633 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
LITAF-221ENST00000622633 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
LITAF-221ENST00000622633 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
LITAF-221ENST00000622633 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
LITAF-221ENST00000622633 LPAP08519 4548 aa6.08□□□□□ -1.44
LITAF-221ENST00000622633 LRP2P98164 4655 aa6.05□□□□□ -1.44
LITAF-221ENST00000622633 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
LITAF-221ENST00000622633 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
LITAF-221ENST00000622633 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
LITAF-221ENST00000622633 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
LITAF-221ENST00000622633 M0QZ58 72 aa5.88□□□□□ -1.47
LITAF-221ENST00000622633 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
LITAF-221ENST00000622633 HERC2O95714 4834 aa5.76□□□□□ -1.49
LITAF-221ENST00000622633 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
LITAF-221ENST00000622633 R4GN34 69 aa5.75□□□□□ -1.49
LITAF-221ENST00000622633 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
LITAF-221ENST00000622633 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
LITAF-221ENST00000622633 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
LITAF-221ENST00000622633 INE1O15225 51 aa5.63□□□□□ -1.51
LITAF-221ENST00000622633 BIRC6Q9NR09 4857 aa5.63□□□□□ -1.51
LITAF-221ENST00000622633 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
LITAF-221ENST00000622633 MUC2Q02817 5179 aa5.59□□□□□ -1.51
LITAF-221ENST00000622633 HERC1Q15751 4861 aa5.58□□□□□ -1.52
LITAF-221ENST00000622633 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
LITAF-221ENST00000622633 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
LITAF-221ENST00000622633 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
LITAF-221ENST00000622633 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
LITAF-221ENST00000622633 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
LITAF-221ENST00000622633 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
LITAF-221ENST00000622633 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
LITAF-221ENST00000622633 TNP1P09430 55 aa5.26□□□□□ -1.57
LITAF-221ENST00000622633 M0R2T5 61 aa5.18□□□□□ -1.58
LITAF-221ENST00000622633 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
LITAF-221ENST00000622633 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
LITAF-221ENST00000622633 MT1HP80294 61 aa5.13□□□□□ -1.59
LITAF-221ENST00000622633 MT1FP04733 61 aa5.07□□□□□ -1.6
LITAF-221ENST00000622633 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
LITAF-221ENST00000622633 MT2AP02795 61 aa5.06□□□□□ -1.6
LITAF-221ENST00000622633 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
LITAF-221ENST00000622633 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
LITAF-221ENST00000622633 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
LITAF-221ENST00000622633 MT1BP07438 61 aa4.9□□□□□ -1.62
LITAF-221ENST00000622633 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
LITAF-221ENST00000622633 MT1XP80297 61 aa4.88□□□□□ -1.63
LITAF-221ENST00000622633 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
LITAF-221ENST00000622633 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
LITAF-221ENST00000622633 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
LITAF-221ENST00000622633 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
LITAF-221ENST00000622633 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
LITAF-221ENST00000622633 USH2AO75445 5202 aa4.66□□□□□ -1.66
LITAF-221ENST00000622633 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
LITAF-221ENST00000622633 KMT2DO14686 5537 aa4.49□□□□□ -1.69
LITAF-221ENST00000622633 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
LITAF-221ENST00000622633 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
LITAF-221ENST00000622633 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
LITAF-221ENST00000622633 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
LITAF-221ENST00000622633 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
LITAF-221ENST00000622633 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
LITAF-221ENST00000622633 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
LITAF-221ENST00000622633 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
LITAF-221ENST00000622633 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.71
LITAF-221ENST00000622633 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
LITAF-221ENST00000622633 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
LITAF-221ENST00000622633 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
LITAF-221ENST00000622633 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
LITAF-221ENST00000622633 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms