RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
CHD1L-210ENST00000622533 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
CHD1L-210ENST00000622533 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
CHD1L-210ENST00000622533 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
CHD1L-210ENST00000622533 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
CHD1L-210ENST00000622533 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
CHD1L-210ENST00000622533 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
CHD1L-210ENST00000622533 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
CHD1L-210ENST00000622533 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.33
CHD1L-210ENST00000622533 RYR3Q15413 4870 aa6.77□□□□□ -1.33
CHD1L-210ENST00000622533 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
CHD1L-210ENST00000622533 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
CHD1L-210ENST00000622533 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
CHD1L-210ENST00000622533 RYR2Q92736 4967 aa6.71□□□□□ -1.34
CHD1L-210ENST00000622533 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
CHD1L-210ENST00000622533 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
CHD1L-210ENST00000622533 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
CHD1L-210ENST00000622533 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
CHD1L-210ENST00000622533 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
CHD1L-210ENST00000622533 S4R3F8 94 aa6.62□□□□□ -1.35
CHD1L-210ENST00000622533 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CHD1L-210ENST00000622533 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
CHD1L-210ENST00000622533 XP32Q5T750 250 aa6.57□□□□□ -1.36
CHD1L-210ENST00000622533 HSPG2P98160 4391 aa6.52□□□□□ -1.37
CHD1L-210ENST00000622533 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
CHD1L-210ENST00000622533 Q5VSD8 79 aa6.5□□□□□ -1.37
CHD1L-210ENST00000622533 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
CHD1L-210ENST00000622533 TNXBP22105 4242 aa6.49□□□□□ -1.37
CHD1L-210ENST00000622533 RYR1P21817 5038 aa6.48□□□□□ -1.37
CHD1L-210ENST00000622533 LPAP08519 4548 aa6.42□□□□□ -1.38
CHD1L-210ENST00000622533 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
CHD1L-210ENST00000622533 M0QZ58 72 aa6.38□□□□□ -1.39
CHD1L-210ENST00000622533 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
CHD1L-210ENST00000622533 LRP2P98164 4655 aa6.34□□□□□ -1.39
CHD1L-210ENST00000622533 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
CHD1L-210ENST00000622533 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
CHD1L-210ENST00000622533 MUC2Q02817 5179 aa6.31□□□□□ -1.4
CHD1L-210ENST00000622533 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
CHD1L-210ENST00000622533 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
CHD1L-210ENST00000622533 R4GN34 69 aa6.15□□□□□ -1.42
CHD1L-210ENST00000622533 HERC2O95714 4834 aa6.15□□□□□ -1.43
CHD1L-210ENST00000622533 HERC1Q15751 4861 aa6.11□□□□□ -1.43
CHD1L-210ENST00000622533 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
CHD1L-210ENST00000622533 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
CHD1L-210ENST00000622533 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
CHD1L-210ENST00000622533 J3QL48 77 aa6.01□□□□□ -1.45
CHD1L-210ENST00000622533 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
CHD1L-210ENST00000622533 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
CHD1L-210ENST00000622533 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
CHD1L-210ENST00000622533 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
CHD1L-210ENST00000622533 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
CHD1L-210ENST00000622533 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
CHD1L-210ENST00000622533 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
CHD1L-210ENST00000622533 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
CHD1L-210ENST00000622533 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
CHD1L-210ENST00000622533 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
CHD1L-210ENST00000622533 TNP1P09430 55 aa5.68□□□□□ -1.5
CHD1L-210ENST00000622533 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
CHD1L-210ENST00000622533 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
CHD1L-210ENST00000622533 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
CHD1L-210ENST00000622533 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
CHD1L-210ENST00000622533 M0R2T5 61 aa5.47□□□□□ -1.53
CHD1L-210ENST00000622533 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
CHD1L-210ENST00000622533 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
CHD1L-210ENST00000622533 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
CHD1L-210ENST00000622533 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CHD1L-210ENST00000622533 USH2AO75445 5202 aa5.32□□□□□ -1.56
CHD1L-210ENST00000622533 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
CHD1L-210ENST00000622533 MT1HP80294 61 aa5.27□□□□□ -1.57
CHD1L-210ENST00000622533 INE1O15225 51 aa5.27□□□□□ -1.57
CHD1L-210ENST00000622533 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
CHD1L-210ENST00000622533 MT2AP02795 61 aa5.23□□□□□ -1.57
CHD1L-210ENST00000622533 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
CHD1L-210ENST00000622533 MT1FP04733 61 aa5.22□□□□□ -1.57
CHD1L-210ENST00000622533 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
CHD1L-210ENST00000622533 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
CHD1L-210ENST00000622533 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
CHD1L-210ENST00000622533 KMT2DO14686 5537 aa5.09□□□□□ -1.59
CHD1L-210ENST00000622533 MT1BP07438 61 aa5.09□□□□□ -1.6
CHD1L-210ENST00000622533 MT1XP80297 61 aa5.09□□□□□ -1.6
CHD1L-210ENST00000622533 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
CHD1L-210ENST00000622533 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
CHD1L-210ENST00000622533 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
CHD1L-210ENST00000622533 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
CHD1L-210ENST00000622533 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
CHD1L-210ENST00000622533 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
CHD1L-210ENST00000622533 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
CHD1L-210ENST00000622533 LCE2BO14633 110 aa4.73□□□□□ -1.65
CHD1L-210ENST00000622533 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
CHD1L-210ENST00000622533 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
CHD1L-210ENST00000622533 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
CHD1L-210ENST00000622533 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
CHD1L-210ENST00000622533 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
CHD1L-210ENST00000622533 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
CHD1L-210ENST00000622533 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CHD1L-210ENST00000622533 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.68
CHD1L-210ENST00000622533 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CHD1L-210ENST00000622533 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CHD1L-210ENST00000622533 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
CHD1L-210ENST00000622533 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms