RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 KRTAP19-8Q3LI54 63 aa9.18□□□□□ -0.94
SMC6-210ENST00000621152 A6NN06 94 aa9.17□□□□□ -0.94
SMC6-210ENST00000621152 HIST1H4AP62805 103 aaKnown RBP9.17□□□□□ -0.94
SMC6-210ENST00000621152 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
SMC6-210ENST00000621152 UQCRQO14949 82 aa9.13□□□□□ -0.95
SMC6-210ENST00000621152 ATP5EP2Q5VTU8 51 aa9.13□□□□□ -0.95
SMC6-210ENST00000621152 H0Y9P7 68 aa9.09□□□□□ -0.95
SMC6-210ENST00000621152 ATOX1O00244 68 aa9.07□□□□□ -0.96
SMC6-210ENST00000621152 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
SMC6-210ENST00000621152 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
SMC6-210ENST00000621152 NDUFC1O43677 76 aa9.03□□□□□ -0.96
SMC6-210ENST00000621152 KRTAP10-5P60370 271 aa9.02□□□□□ -0.97
SMC6-210ENST00000621152 LINC00643Q86TS7 51 aa9.01□□□□□ -0.97
SMC6-210ENST00000621152 LINC00208Q96KT6 92 aa8.96□□□□□ -0.98
SMC6-210ENST00000621152 A8MUN3 132 aa8.93□□□□□ -0.98
SMC6-210ENST00000621152 H0YAA0 97 aa8.93□□□□□ -0.98
SMC6-210ENST00000621152 MP68P56378 58 aa8.88□□□□□ -0.99
SMC6-210ENST00000621152 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
SMC6-210ENST00000621152 MT-ATP8P03928 68 aa8.87□□□□□ -0.99
SMC6-210ENST00000621152 OCR1Q9BZK8 76 aa8.87□□□□□ -0.99
SMC6-210ENST00000621152 H3BPC8 53 aa8.72□□□□□ -1.01
SMC6-210ENST00000621152 NEBP20929 6669 aa8.72□□□□□ -1.01
SMC6-210ENST00000621152 KRTAP5-9P26371 169 aa8.71□□□□□ -1.02
SMC6-210ENST00000621152 SCGB1A1P11684 91 aa8.7□□□□□ -1.02
SMC6-210ENST00000621152 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
SMC6-210ENST00000621152 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.02
SMC6-210ENST00000621152 P0C880 135 aa8.65□□□□□ -1.02
SMC6-210ENST00000621152 PRO2289Q9P1D8 64 aa8.65□□□□□ -1.02
SMC6-210ENST00000621152 R4GN34 69 aa8.65□□□□□ -1.02
SMC6-210ENST00000621152 DMAC1Q96GE9 116 aa8.64□□□□□ -1.03
SMC6-210ENST00000621152 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
SMC6-210ENST00000621152 MT1XP80297 61 aa8.61□□□□□ -1.03
SMC6-210ENST00000621152 M0QZ58 72 aa8.58□□□□□ -1.04
SMC6-210ENST00000621152 KRTAP20-1Q3LI63 56 aa8.57□□□□□ -1.04
SMC6-210ENST00000621152 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
SMC6-210ENST00000621152 SMIM20Q8N5G0 67 aa8.5□□□□□ -1.05
SMC6-210ENST00000621152 KMT2DO14686 5537 aa8.5□□□□□ -1.05
SMC6-210ENST00000621152 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
SMC6-210ENST00000621152 SPRR2FQ96RM1 72 aa8.48□□□□□ -1.05
SMC6-210ENST00000621152 TRAV7A0A075B6U4 112 aa8.47□□□□□ -1.05
SMC6-210ENST00000621152 ACYP2P14621 99 aa8.47□□□□□ -1.05
SMC6-210ENST00000621152 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
SMC6-210ENST00000621152 KRTAP8-1Q8IUC2 63 aa8.42□□□□□ -1.06
SMC6-210ENST00000621152 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
SMC6-210ENST00000621152 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
SMC6-210ENST00000621152 MDN1Q9NU22 5596 aa8.39□□□□□ -1.07
SMC6-210ENST00000621152 SPRR2EP22531 72 aa8.37□□□□□ -1.07
SMC6-210ENST00000621152 SPRR2BP35325 72 aa8.37□□□□□ -1.07
SMC6-210ENST00000621152 SPRR2AP35326 72 aa8.37□□□□□ -1.07
SMC6-210ENST00000621152 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
SMC6-210ENST00000621152 COX7CP15954 63 aa8.36□□□□□ -1.07
SMC6-210ENST00000621152 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
SMC6-210ENST00000621152 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
SMC6-210ENST00000621152 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
SMC6-210ENST00000621152 PCP4P48539 62 aa8.31□□□□□ -1.08
SMC6-210ENST00000621152 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
SMC6-210ENST00000621152 CHKB-CPT1BH3BT56 60 aa8.3□□□□□ -1.08
SMC6-210ENST00000621152 SNURFQ9Y675 71 aa8.26□□□□□ -1.09
SMC6-210ENST00000621152 CCDC179H3BU77 68 aa8.24□□□□□ -1.09
SMC6-210ENST00000621152 LCE1AQ5T7P2 110 aa8.24□□□□□ -1.09
SMC6-210ENST00000621152 KRTAP10-7P60409 375 aaPredicted RBP8.23□□□□□ -1.09
SMC6-210ENST00000621152 KRTAP10-12P60413 245 aa8.17□□□□□ -1.1
SMC6-210ENST00000621152 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
SMC6-210ENST00000621152 SPRR2DP22532 72 aa8.09□□□□□ -1.11
SMC6-210ENST00000621152 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
SMC6-210ENST00000621152 KRTAP2-2Q9BYT5 123 aa8.08□□□□□ -1.12
SMC6-210ENST00000621152 KRTAP2-1Q9BYU5 128 aa8.08□□□□□ -1.12
SMC6-210ENST00000621152 H7BZZ5 65 aa8.05□□□□□ -1.12
SMC6-210ENST00000621152 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
SMC6-210ENST00000621152 TMEM258P61165 79 aa7.97□□□□□ -1.13
SMC6-210ENST00000621152 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
SMC6-210ENST00000621152 COA5Q86WW8 74 aa7.93□□□□□ -1.14
SMC6-210ENST00000621152 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
SMC6-210ENST00000621152 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
SMC6-210ENST00000621152 SEC61GP60059 68 aa7.86□□□□□ -1.15
SMC6-210ENST00000621152 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
SMC6-210ENST00000621152 A0A0D9SG42 100 aa7.82□□□□□ -1.16
SMC6-210ENST00000621152 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
SMC6-210ENST00000621152 A0A1B0GU33 70 aa7.73□□□□□ -1.17
SMC6-210ENST00000621152 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
SMC6-210ENST00000621152 KRTAP19-7Q3SYF9 63 aa7.69□□□□□ -1.18
SMC6-210ENST00000621152 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
SMC6-210ENST00000621152 MT1EP04732 61 aa7.63□□□□□ -1.19
SMC6-210ENST00000621152 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
SMC6-210ENST00000621152 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
SMC6-210ENST00000621152 KRTAP19-3Q7Z4W3 81 aa7.59□□□□□ -1.19
SMC6-210ENST00000621152 A0A1B0GU69 56 aa7.54□□□□□ -1.2
SMC6-210ENST00000621152 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
SMC6-210ENST00000621152 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
SMC6-210ENST00000621152 A8MU10 97 aa7.46□□□□□ -1.22
SMC6-210ENST00000621152 MT1GP13640 62 aa7.43□□□□□ -1.22
SMC6-210ENST00000621152 V9GYY9 64 aa7.41□□□□□ -1.22
SMC6-210ENST00000621152 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
SMC6-210ENST00000621152 DSTQ03001 7570 aaKnown RBP7.4□□□□□ -1.23
SMC6-210ENST00000621152 Q1T7F1 81 aa7.39□□□□□ -1.23
SMC6-210ENST00000621152 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
SMC6-210ENST00000621152 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
SMC6-210ENST00000621152 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
SMC6-210ENST00000621152 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
SMC6-210ENST00000621152 TNP1P09430 55 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms