RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
TNFAIP3-211ENST00000621150 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
TNFAIP3-211ENST00000621150 SERP1Q9Y6X1 66 aa6.59□□□□□ -1.35
TNFAIP3-211ENST00000621150 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
TNFAIP3-211ENST00000621150 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
TNFAIP3-211ENST00000621150 HRES1P13985 223 aa6.55□□□□□ -1.36
TNFAIP3-211ENST00000621150 RBM12B-AS1Q9P1G2 102 aa6.55□□□□□ -1.36
TNFAIP3-211ENST00000621150 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
TNFAIP3-211ENST00000621150 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
TNFAIP3-211ENST00000621150 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
TNFAIP3-211ENST00000621150 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
TNFAIP3-211ENST00000621150 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
TNFAIP3-211ENST00000621150 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
TNFAIP3-211ENST00000621150 SPINK7P58062 85 aa6.48□□□□□ -1.37
TNFAIP3-211ENST00000621150 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
TNFAIP3-211ENST00000621150 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
TNFAIP3-211ENST00000621150 COA5Q86WW8 74 aa6.43□□□□□ -1.38
TNFAIP3-211ENST00000621150 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
TNFAIP3-211ENST00000621150 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
TNFAIP3-211ENST00000621150 ACYP2P14621 99 aa6.4□□□□□ -1.38
TNFAIP3-211ENST00000621150 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
TNFAIP3-211ENST00000621150 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
TNFAIP3-211ENST00000621150 A8MUN3 132 aa6.38□□□□□ -1.39
TNFAIP3-211ENST00000621150 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
TNFAIP3-211ENST00000621150 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
TNFAIP3-211ENST00000621150 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
TNFAIP3-211ENST00000621150 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
TNFAIP3-211ENST00000621150 Q1T7F1 81 aa6.31□□□□□ -1.4
TNFAIP3-211ENST00000621150 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
TNFAIP3-211ENST00000621150 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
TNFAIP3-211ENST00000621150 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
TNFAIP3-211ENST00000621150 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
TNFAIP3-211ENST00000621150 MT1HP80294 61 aa6.17□□□□□ -1.42
TNFAIP3-211ENST00000621150 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
TNFAIP3-211ENST00000621150 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
TNFAIP3-211ENST00000621150 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
TNFAIP3-211ENST00000621150 Q5VV11 94 aa6.14□□□□□ -1.43
TNFAIP3-211ENST00000621150 LCA10Q71F78 164 aa6.13□□□□□ -1.43
TNFAIP3-211ENST00000621150 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
TNFAIP3-211ENST00000621150 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
TNFAIP3-211ENST00000621150 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
TNFAIP3-211ENST00000621150 S4R3F8 94 aa6.1□□□□□ -1.43
TNFAIP3-211ENST00000621150 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
TNFAIP3-211ENST00000621150 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
TNFAIP3-211ENST00000621150 A0A1B0GU69 56 aa6.04□□□□□ -1.44
TNFAIP3-211ENST00000621150 M0R2T5 61 aa6.04□□□□□ -1.44
TNFAIP3-211ENST00000621150 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
TNFAIP3-211ENST00000621150 CSAG1Q6PB30 78 aa5.96□□□□□ -1.46
TNFAIP3-211ENST00000621150 K7ERS5 55 aa5.94□□□□□ -1.46
TNFAIP3-211ENST00000621150 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
TNFAIP3-211ENST00000621150 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
TNFAIP3-211ENST00000621150 A6NED7 52 aa5.92□□□□□ -1.46
TNFAIP3-211ENST00000621150 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
TNFAIP3-211ENST00000621150 A8MU10 97 aa5.91□□□□□ -1.46
TNFAIP3-211ENST00000621150 H0YAA0 97 aa5.91□□□□□ -1.46
TNFAIP3-211ENST00000621150 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
TNFAIP3-211ENST00000621150 UQCR11O14957 56 aa5.88□□□□□ -1.47
TNFAIP3-211ENST00000621150 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
TNFAIP3-211ENST00000621150 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
TNFAIP3-211ENST00000621150 P0C880 135 aa5.87□□□□□ -1.47
TNFAIP3-211ENST00000621150 A0A1B0GU33 70 aa5.86□□□□□ -1.47
TNFAIP3-211ENST00000621150 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
TNFAIP3-211ENST00000621150 USH2AO75445 5202 aa5.84□□□□□ -1.47
TNFAIP3-211ENST00000621150 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
TNFAIP3-211ENST00000621150 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
TNFAIP3-211ENST00000621150 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
TNFAIP3-211ENST00000621150 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
TNFAIP3-211ENST00000621150 MT2AP02795 61 aa5.74□□□□□ -1.49
TNFAIP3-211ENST00000621150 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
TNFAIP3-211ENST00000621150 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
TNFAIP3-211ENST00000621150 M0QZ58 72 aa5.7□□□□□ -1.5
TNFAIP3-211ENST00000621150 MT1FP04733 61 aa5.7□□□□□ -1.5
TNFAIP3-211ENST00000621150 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
TNFAIP3-211ENST00000621150 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
TNFAIP3-211ENST00000621150 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
TNFAIP3-211ENST00000621150 MT3P25713 68 aa5.63□□□□□ -1.51
TNFAIP3-211ENST00000621150 A6NN06 94 aa5.63□□□□□ -1.51
TNFAIP3-211ENST00000621150 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
TNFAIP3-211ENST00000621150 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
TNFAIP3-211ENST00000621150 R4GN34 69 aa5.6□□□□□ -1.51
TNFAIP3-211ENST00000621150 A0A0D9SG42 100 aa5.59□□□□□ -1.52
TNFAIP3-211ENST00000621150 CRIPTQ9P021 101 aa5.59□□□□□ -1.52
TNFAIP3-211ENST00000621150 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
TNFAIP3-211ENST00000621150 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
TNFAIP3-211ENST00000621150 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
TNFAIP3-211ENST00000621150 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
TNFAIP3-211ENST00000621150 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
TNFAIP3-211ENST00000621150 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
TNFAIP3-211ENST00000621150 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
TNFAIP3-211ENST00000621150 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
TNFAIP3-211ENST00000621150 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
TNFAIP3-211ENST00000621150 LCE1FQ5T754 118 aa5.36□□□□□ -1.55
TNFAIP3-211ENST00000621150 ROMO1P60602 79 aa5.34□□□□□ -1.56
TNFAIP3-211ENST00000621150 MT1BP07438 61 aa5.3□□□□□ -1.56
TNFAIP3-211ENST00000621150 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
TNFAIP3-211ENST00000621150 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
TNFAIP3-211ENST00000621150 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
TNFAIP3-211ENST00000621150 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
TNFAIP3-211ENST00000621150 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
TNFAIP3-211ENST00000621150 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms