RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 Q5VSD8 79 aa5.1□□□□□ -1.59
TNFAIP3-210ENST00000620204 DYNC1H1Q14204 4646 aaKnown RBP5.1□□□□□ -1.59
TNFAIP3-210ENST00000620204 S4R3F8 94 aa5.09□□□□□ -1.59
TNFAIP3-210ENST00000620204 FAT2Q9NYQ8 4349 aa5.09□□□□□ -1.6
TNFAIP3-210ENST00000620204 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
TNFAIP3-210ENST00000620204 RYR2Q92736 4967 aa5.05□□□□□ -1.6
TNFAIP3-210ENST00000620204 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
TNFAIP3-210ENST00000620204 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
TNFAIP3-210ENST00000620204 PKD1P98161 4303 aa5.04□□□□□ -1.6
TNFAIP3-210ENST00000620204 VPS13BQ7Z7G8 4022 aa5.04□□□□□ -1.6
TNFAIP3-210ENST00000620204 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
TNFAIP3-210ENST00000620204 RYR3Q15413 4870 aa5□□□□□ -1.61
TNFAIP3-210ENST00000620204 KIAA1109Q2LD37 5005 aa4.99□□□□□ -1.61
TNFAIP3-210ENST00000620204 APOBP04114 4563 aaKnown RBP4.97□□□□□ -1.61
TNFAIP3-210ENST00000620204 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
TNFAIP3-210ENST00000620204 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
TNFAIP3-210ENST00000620204 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
TNFAIP3-210ENST00000620204 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
TNFAIP3-210ENST00000620204 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
TNFAIP3-210ENST00000620204 LRP1Q07954 4544 aaKnown RBP4.91□□□□□ -1.62
TNFAIP3-210ENST00000620204 J3QL48 77 aa4.9□□□□□ -1.62
TNFAIP3-210ENST00000620204 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.63
TNFAIP3-210ENST00000620204 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
TNFAIP3-210ENST00000620204 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
TNFAIP3-210ENST00000620204 M0QZ58 72 aa4.88□□□□□ -1.63
TNFAIP3-210ENST00000620204 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
TNFAIP3-210ENST00000620204 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
TNFAIP3-210ENST00000620204 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
TNFAIP3-210ENST00000620204 RYR1P21817 5038 aa4.85□□□□□ -1.63
TNFAIP3-210ENST00000620204 R4GN34 69 aa4.85□□□□□ -1.63
TNFAIP3-210ENST00000620204 XP32Q5T750 250 aa4.83□□□□□ -1.64
TNFAIP3-210ENST00000620204 HSPG2P98160 4391 aa4.82□□□□□ -1.64
TNFAIP3-210ENST00000620204 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
TNFAIP3-210ENST00000620204 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
TNFAIP3-210ENST00000620204 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
TNFAIP3-210ENST00000620204 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
TNFAIP3-210ENST00000620204 HERC2O95714 4834 aa4.65□□□□□ -1.67
TNFAIP3-210ENST00000620204 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
TNFAIP3-210ENST00000620204 TNXBP22105 4242 aa4.59□□□□□ -1.67
TNFAIP3-210ENST00000620204 LPAP08519 4548 aa4.58□□□□□ -1.68
TNFAIP3-210ENST00000620204 LRP2P98164 4655 aa4.57□□□□□ -1.68
TNFAIP3-210ENST00000620204 BIRC6Q9NR09 4857 aa4.56□□□□□ -1.68
TNFAIP3-210ENST00000620204 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
TNFAIP3-210ENST00000620204 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
TNFAIP3-210ENST00000620204 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
TNFAIP3-210ENST00000620204 HERC1Q15751 4861 aa4.47□□□□□ -1.69
TNFAIP3-210ENST00000620204 PCLOQ9Y6V0 5065 aa4.44□□□□□ -1.7
TNFAIP3-210ENST00000620204 TNP1P09430 55 aa4.44□□□□□ -1.7
TNFAIP3-210ENST00000620204 MUC2Q02817 5179 aa4.38□□□□□ -1.71
TNFAIP3-210ENST00000620204 M0R2T5 61 aa4.36□□□□□ -1.71
TNFAIP3-210ENST00000620204 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
TNFAIP3-210ENST00000620204 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
TNFAIP3-210ENST00000620204 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
TNFAIP3-210ENST00000620204 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
TNFAIP3-210ENST00000620204 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
TNFAIP3-210ENST00000620204 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
TNFAIP3-210ENST00000620204 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
TNFAIP3-210ENST00000620204 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
TNFAIP3-210ENST00000620204 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
TNFAIP3-210ENST00000620204 INE1O15225 51 aa4.06□□□□□ -1.76
TNFAIP3-210ENST00000620204 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
TNFAIP3-210ENST00000620204 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
TNFAIP3-210ENST00000620204 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
TNFAIP3-210ENST00000620204 MT1HP80294 61 aa4□□□□□ -1.77
TNFAIP3-210ENST00000620204 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
TNFAIP3-210ENST00000620204 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
TNFAIP3-210ENST00000620204 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
TNFAIP3-210ENST00000620204 MT1FP04733 61 aa3.88□□□□□ -1.79
TNFAIP3-210ENST00000620204 MT2AP02795 61 aa3.88□□□□□ -1.79
TNFAIP3-210ENST00000620204 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
TNFAIP3-210ENST00000620204 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
TNFAIP3-210ENST00000620204 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
TNFAIP3-210ENST00000620204 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
TNFAIP3-210ENST00000620204 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
TNFAIP3-210ENST00000620204 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
TNFAIP3-210ENST00000620204 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
TNFAIP3-210ENST00000620204 USH2AO75445 5202 aa3.73□□□□□ -1.81
TNFAIP3-210ENST00000620204 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
TNFAIP3-210ENST00000620204 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
TNFAIP3-210ENST00000620204 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
TNFAIP3-210ENST00000620204 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
TNFAIP3-210ENST00000620204 MT1XP80297 61 aa3.64□□□□□ -1.83
TNFAIP3-210ENST00000620204 MT1BP07438 61 aa3.62□□□□□ -1.83
TNFAIP3-210ENST00000620204 LCE2BO14633 110 aa3.61□□□□□ -1.83
TNFAIP3-210ENST00000620204 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
TNFAIP3-210ENST00000620204 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
TNFAIP3-210ENST00000620204 KMT2DO14686 5537 aa3.58□□□□□ -1.84
TNFAIP3-210ENST00000620204 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
TNFAIP3-210ENST00000620204 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
TNFAIP3-210ENST00000620204 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
TNFAIP3-210ENST00000620204 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
TNFAIP3-210ENST00000620204 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
TNFAIP3-210ENST00000620204 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
TNFAIP3-210ENST00000620204 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
TNFAIP3-210ENST00000620204 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
TNFAIP3-210ENST00000620204 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
TNFAIP3-210ENST00000620204 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
TNFAIP3-210ENST00000620204 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
TNFAIP3-210ENST00000620204 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
TNFAIP3-210ENST00000620204 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms