RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 LPAP08519 4548 aa10.99□□□□□ -0.65
CNTNAP3B-212ENST00000617422 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
CNTNAP3B-212ENST00000617422 SPATA8Q6RVD6 105 aa10.96□□□□□ -0.65
CNTNAP3B-212ENST00000617422 PCLOQ9Y6V0 5065 aa10.95□□□□□ -0.66
CNTNAP3B-212ENST00000617422 LRP2P98164 4655 aa10.94□□□□□ -0.66
CNTNAP3B-212ENST00000617422 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
CNTNAP3B-212ENST00000617422 J3QL48 77 aa10.92□□□□□ -0.66
CNTNAP3B-212ENST00000617422 UQCR11O14957 56 aa10.92□□□□□ -0.66
CNTNAP3B-212ENST00000617422 MIR22HGQ0VDD5 57 aa10.88□□□□□ -0.67
CNTNAP3B-212ENST00000617422 TPRXLQ17RH7 258 aa10.88□□□□□ -0.67
CNTNAP3B-212ENST00000617422 HERC1Q15751 4861 aa10.75□□□□□ -0.69
CNTNAP3B-212ENST00000617422 KRTAP3-1Q9BYR8 98 aa10.7□□□□□ -0.7
CNTNAP3B-212ENST00000617422 PRAC1Q96KF2 57 aa10.64□□□□□ -0.71
CNTNAP3B-212ENST00000617422 ADM2Q7Z4H4 148 aa10.59□□□□□ -0.71
CNTNAP3B-212ENST00000617422 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
CNTNAP3B-212ENST00000617422 COX6B2Q6YFQ2 88 aa10.56□□□□□ -0.72
CNTNAP3B-212ENST00000617422 MUC17Q685J3 4493 aa10.49□□□□□ -0.73
CNTNAP3B-212ENST00000617422 H0YAA0 97 aa10.45□□□□□ -0.74
CNTNAP3B-212ENST00000617422 KRTAP4-1Q9BYQ7 146 aa10.45□□□□□ -0.74
CNTNAP3B-212ENST00000617422 SEC61BP60468 96 aaKnown RBP10.45□□□□□ -0.74
CNTNAP3B-212ENST00000617422 A0A1B0GU33 70 aa10.44□□□□□ -0.74
CNTNAP3B-212ENST00000617422 LINC01554Q52M75 96 aa10.44□□□□□ -0.74
CNTNAP3B-212ENST00000617422 H1FX-AS1Q4G0G2 97 aa10.41□□□□□ -0.74
CNTNAP3B-212ENST00000617422 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
CNTNAP3B-212ENST00000617422 MUC2Q02817 5179 aa10.35□□□□□ -0.75
CNTNAP3B-212ENST00000617422 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
CNTNAP3B-212ENST00000617422 S4R3F8 94 aa10.22□□□□□ -0.77
CNTNAP3B-212ENST00000617422 K7ERS5 55 aa10.21□□□□□ -0.77
CNTNAP3B-212ENST00000617422 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
CNTNAP3B-212ENST00000617422 UBR4Q5T4S7 5183 aa10.14□□□□□ -0.79
CNTNAP3B-212ENST00000617422 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
CNTNAP3B-212ENST00000617422 RNF213Q63HN8 5207 aa10.06□□□□□ -0.8
CNTNAP3B-212ENST00000617422 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
CNTNAP3B-212ENST00000617422 FLGP20930 4061 aaPredicted RBP9.97□□□□□ -0.81
CNTNAP3B-212ENST00000617422 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
CNTNAP3B-212ENST00000617422 ROMO1P60602 79 aa9.95□□□□□ -0.82
CNTNAP3B-212ENST00000617422 KRTAP13-4Q3LI77 160 aa9.9□□□□□ -0.83
CNTNAP3B-212ENST00000617422 FAT4Q6V0I7 4981 aa9.89□□□□□ -0.83
CNTNAP3B-212ENST00000617422 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
CNTNAP3B-212ENST00000617422 P0C880 135 aa9.87□□□□□ -0.83
CNTNAP3B-212ENST00000617422 A0A0D9SG42 100 aa9.84□□□□□ -0.83
CNTNAP3B-212ENST00000617422 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
CNTNAP3B-212ENST00000617422 MT1HP80294 61 aa9.62□□□□□ -0.87
CNTNAP3B-212ENST00000617422 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
CNTNAP3B-212ENST00000617422 M0QZ58 72 aa9.61□□□□□ -0.87
CNTNAP3B-212ENST00000617422 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
CNTNAP3B-212ENST00000617422 H3BS24 57 aa9.57□□□□□ -0.88
CNTNAP3B-212ENST00000617422 KRTAP12-1P59990 96 aa9.57□□□□□ -0.88
CNTNAP3B-212ENST00000617422 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
CNTNAP3B-212ENST00000617422 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
CNTNAP3B-212ENST00000617422 M0R2T5 61 aa9.46□□□□□ -0.89
CNTNAP3B-212ENST00000617422 R4GN34 69 aa9.46□□□□□ -0.9
CNTNAP3B-212ENST00000617422 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
CNTNAP3B-212ENST00000617422 MT2AP02795 61 aa9.28□□□□□ -0.92
CNTNAP3B-212ENST00000617422 MT1FP04733 61 aa9.26□□□□□ -0.93
CNTNAP3B-212ENST00000617422 KRTAP15-1Q3LI76 137 aa9.24□□□□□ -0.93
CNTNAP3B-212ENST00000617422 KRTAP10-10P60014 251 aa9.16□□□□□ -0.94
CNTNAP3B-212ENST00000617422 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-212ENST00000617422 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
CNTNAP3B-212ENST00000617422 SPRR2GQ9BYE4 73 aa9.11□□□□□ -0.95
CNTNAP3B-212ENST00000617422 NDUFAF8A1L188 74 aa9□□□□□ -0.97
CNTNAP3B-212ENST00000617422 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
CNTNAP3B-212ENST00000617422 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
CNTNAP3B-212ENST00000617422 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
CNTNAP3B-212ENST00000617422 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
CNTNAP3B-212ENST00000617422 PLAC4Q8WY50 150 aa8.82□□□□□ -1
CNTNAP3B-212ENST00000617422 MT1BP07438 61 aa8.79□□□□□ -1
CNTNAP3B-212ENST00000617422 LCE2BO14633 110 aa8.72□□□□□ -1.01
CNTNAP3B-212ENST00000617422 USH2AO75445 5202 aa8.59□□□□□ -1.03
CNTNAP3B-212ENST00000617422 KRTAP23-1A1A580 65 aa8.56□□□□□ -1.04
CNTNAP3B-212ENST00000617422 TNP1P09430 55 aa8.55□□□□□ -1.04
CNTNAP3B-212ENST00000617422 MT1XP80297 61 aa8.54□□□□□ -1.04
CNTNAP3B-212ENST00000617422 KRTAP10-5P60370 271 aa8.52□□□□□ -1.04
CNTNAP3B-212ENST00000617422 LUZP6Q538Z0 58 aa8.49□□□□□ -1.05
CNTNAP3B-212ENST00000617422 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
CNTNAP3B-212ENST00000617422 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
CNTNAP3B-212ENST00000617422 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
CNTNAP3B-212ENST00000617422 SPRR5A0A1B0GTR4 108 aa8.23□□□□□ -1.09
CNTNAP3B-212ENST00000617422 KRTAP10-7P60409 375 aaPredicted RBP8.22□□□□□ -1.09
CNTNAP3B-212ENST00000617422 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
CNTNAP3B-212ENST00000617422 LCE3AQ5TA76 89 aa8.14□□□□□ -1.11
CNTNAP3B-212ENST00000617422 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
CNTNAP3B-212ENST00000617422 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
CNTNAP3B-212ENST00000617422 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
CNTNAP3B-212ENST00000617422 KMT2DO14686 5537 aa8.04□□□□□ -1.12
CNTNAP3B-212ENST00000617422 KRTAP8-1Q8IUC2 63 aa7.93□□□□□ -1.14
CNTNAP3B-212ENST00000617422 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
CNTNAP3B-212ENST00000617422 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
CNTNAP3B-212ENST00000617422 FCGBPQ9Y6R7 5405 aaPredicted RBP7.88□□□□□ -1.15
CNTNAP3B-212ENST00000617422 KRTAP9-2Q9BYQ4 174 aa7.84□□□□□ -1.15
CNTNAP3B-212ENST00000617422 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
CNTNAP3B-212ENST00000617422 KRTAP19-5Q3LI72 72 aa7.74□□□□□ -1.17
CNTNAP3B-212ENST00000617422 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
CNTNAP3B-212ENST00000617422 CRCT1Q9UGL9 99 aa7.56□□□□□ -1.2
CNTNAP3B-212ENST00000617422 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
CNTNAP3B-212ENST00000617422 MT1EP04732 61 aa7.44□□□□□ -1.22
CNTNAP3B-212ENST00000617422 INE1O15225 51 aa7.39□□□□□ -1.23
CNTNAP3B-212ENST00000617422 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
CNTNAP3B-212ENST00000617422 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
CNTNAP3B-212ENST00000617422 MT1LQ93083 61 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms