RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 MT1LQ93083 61 aa3.47□□□□□ -1.85
AP003900.1-202ENST00000616952 A0A087WVE0 104 aa3.46□□□□□ -1.86
AP003900.1-202ENST00000616952 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
AP003900.1-202ENST00000616952 M0QZ58 72 aa3.45□□□□□ -1.86
AP003900.1-202ENST00000616952 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
AP003900.1-202ENST00000616952 Q6ZQT0 140 aa3.43□□□□□ -1.86
AP003900.1-202ENST00000616952 H0YGX0 51 aa3.42□□□□□ -1.86
AP003900.1-202ENST00000616952 HCG22E2RYF7 251 aa3.4□□□□□ -1.87
AP003900.1-202ENST00000616952 SYS1-DBNDD2H3BUS1 97 aa3.4□□□□□ -1.87
AP003900.1-202ENST00000616952 LINC01545Q5VT33 79 aa3.39□□□□□ -1.87
AP003900.1-202ENST00000616952 A0A1B0GX51 115 aa3.38□□□□□ -1.87
AP003900.1-202ENST00000616952 TMEM218A2RU14 115 aa3.36□□□□□ -1.87
AP003900.1-202ENST00000616952 NDUFC1O43677 76 aa3.35□□□□□ -1.87
AP003900.1-202ENST00000616952 P0C880 135 aa3.33□□□□□ -1.88
AP003900.1-202ENST00000616952 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
AP003900.1-202ENST00000616952 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
AP003900.1-202ENST00000616952 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
AP003900.1-202ENST00000616952 PRO0461Q9UI25 63 aa3.32□□□□□ -1.88
AP003900.1-202ENST00000616952 H3BQ85 93 aa3.31□□□□□ -1.88
AP003900.1-202ENST00000616952 TMEM256-PLSCR3K7ERE1 68 aa3.3□□□□□ -1.88
AP003900.1-202ENST00000616952 PET117Q6UWS5 81 aa3.3□□□□□ -1.88
AP003900.1-202ENST00000616952 DNAL4O96015 105 aa3.29□□□□□ -1.88
AP003900.1-202ENST00000616952 CXCL6P80162 114 aa3.29□□□□□ -1.88
AP003900.1-202ENST00000616952 UBE2V1Q13404 147 aa3.29□□□□□ -1.88
AP003900.1-202ENST00000616952 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
AP003900.1-202ENST00000616952 HIST1H4GQ99525 98 aa3.25□□□□□ -1.89
AP003900.1-202ENST00000616952 A0A1W2PPM0 123 aa3.24□□□□□ -1.89
AP003900.1-202ENST00000616952 BATFQ16520 125 aa3.24□□□□□ -1.89
AP003900.1-202ENST00000616952 C9JAW5 83 aa3.23□□□□□ -1.89
AP003900.1-202ENST00000616952 YPEL4Q96NS1 127 aa3.23□□□□□ -1.89
AP003900.1-202ENST00000616952 ATOH7Q8N100 152 aa3.21□□□□□ -1.9
AP003900.1-202ENST00000616952 A0A0D9SG42 100 aa3.2□□□□□ -1.9
AP003900.1-202ENST00000616952 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
AP003900.1-202ENST00000616952 A0A1B0GW54 56 aa3.17□□□□□ -1.9
AP003900.1-202ENST00000616952 MT-ATP8P03928 68 aa3.17□□□□□ -1.9
AP003900.1-202ENST00000616952 COA6Q5JTJ3 125 aaKnown RBP3.17□□□□□ -1.9
AP003900.1-202ENST00000616952 A0A0B4J2C4 111 aa3.16□□□□□ -1.9
AP003900.1-202ENST00000616952 CLLU1Q5K131 121 aa3.16□□□□□ -1.9
AP003900.1-202ENST00000616952 SNRPEP62304 92 aaKnown RBP3.15□□□□□ -1.91
AP003900.1-202ENST00000616952 NREPQ16612 68 aa3.15□□□□□ -1.91
AP003900.1-202ENST00000616952 KRTDAPP60985 99 aa3.14□□□□□ -1.91
AP003900.1-202ENST00000616952 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
AP003900.1-202ENST00000616952 K7EP34 96 aa3.13□□□□□ -1.91
AP003900.1-202ENST00000616952 SNAPINO95295 136 aa3.12□□□□□ -1.91
AP003900.1-202ENST00000616952 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
AP003900.1-202ENST00000616952 CEND1Q8N111 149 aa3.08□□□□□ -1.92
AP003900.1-202ENST00000616952 APOC3P02656 99 aa3.07□□□□□ -1.92
AP003900.1-202ENST00000616952 Q8N9L7 120 aa3.07□□□□□ -1.92
AP003900.1-202ENST00000616952 CYP4F30PQ9H0H9 118 aa3.07□□□□□ -1.92
AP003900.1-202ENST00000616952 LOC110117498A0A087WWA1 95 aa3.06□□□□□ -1.92
AP003900.1-202ENST00000616952 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
AP003900.1-202ENST00000616952 SVBPQ8N300 66 aa3.04□□□□□ -1.92
AP003900.1-202ENST00000616952 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
AP003900.1-202ENST00000616952 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
AP003900.1-202ENST00000616952 BPY2O14599 106 aa3.02□□□□□ -1.93
AP003900.1-202ENST00000616952 ACYP1P07311 99 aa3.01□□□□□ -1.93
AP003900.1-202ENST00000616952 PSMB2P49721 201 aa3□□□□□ -1.93
AP003900.1-202ENST00000616952 NDUFA5Q16718 116 aa2.98□□□□□ -1.93
AP003900.1-202ENST00000616952 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
AP003900.1-202ENST00000616952 JMJD7-PLA2G4BH0Y9G9 81 aa2.97□□□□□ -1.93
AP003900.1-202ENST00000616952 HSBP1L1C9JCN9 74 aa2.96□□□□□ -1.94
AP003900.1-202ENST00000616952 COX6CP09669 75 aa2.96□□□□□ -1.94
AP003900.1-202ENST00000616952 BAALC-AS2P0C853 105 aa2.96□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST3H2BBQ8N257 126 aa2.96□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BKO60814 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BJP06899 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BOP23527 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BBP33778 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BDP58876 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BCP62807 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST2H2BEQ16778 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BHQ93079 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BNQ99877 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BMQ99879 126 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 C14orf132Q9NPU4 83 aa2.95□□□□□ -1.94
AP003900.1-202ENST00000616952 MT1AP04731 61 aa2.93□□□□□ -1.94
AP003900.1-202ENST00000616952 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
AP003900.1-202ENST00000616952 HIGD1BQ9P298 99 aa2.93□□□□□ -1.94
AP003900.1-202ENST00000616952 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
AP003900.1-202ENST00000616952 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
AP003900.1-202ENST00000616952 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
AP003900.1-202ENST00000616952 COX8AP10176 69 aa2.88□□□□□ -1.95
AP003900.1-202ENST00000616952 FXYD2P54710 66 aa2.87□□□□□ -1.95
AP003900.1-202ENST00000616952 K7ERJ3 54 aa2.85□□□□□ -1.95
AP003900.1-202ENST00000616952 DLEU1O43261 78 aa2.85□□□□□ -1.95
AP003900.1-202ENST00000616952 OCR1Q9BZK8 76 aa2.83□□□□□ -1.96
AP003900.1-202ENST00000616952 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
AP003900.1-202ENST00000616952 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
AP003900.1-202ENST00000616952 SCGB1C2P0DMR2 95 aa2.79□□□□□ -1.96
AP003900.1-202ENST00000616952 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
AP003900.1-202ENST00000616952 C14orf144Q96I85 54 aa2.76□□□□□ -1.97
AP003900.1-202ENST00000616952 ATXN8Q156A1 80 aa2.75□□□□□ -1.97
AP003900.1-202ENST00000616952 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
AP003900.1-202ENST00000616952 VAMP8Q9BV40 100 aa2.72□□□□□ -1.97
AP003900.1-202ENST00000616952 SPCS1Q9Y6A9 102 aa2.66□□□□□ -1.98
AP003900.1-202ENST00000616952 ATOX1O00244 68 aa2.63□□□□□ -1.99
AP003900.1-202ENST00000616952 H0Y9P7 68 aa2.62□□□□□ -1.99
AP003900.1-202ENST00000616952 HSD52Q0P140 79 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms