RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
PPP4R3B-206ENST00000616407 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
PPP4R3B-206ENST00000616407 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
PPP4R3B-206ENST00000616407 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
PPP4R3B-206ENST00000616407 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
PPP4R3B-206ENST00000616407 DYNC2H1Q8NCM8 4307 aaKnown RBP6.47□□□□□ -1.37
PPP4R3B-206ENST00000616407 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
PPP4R3B-206ENST00000616407 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
PPP4R3B-206ENST00000616407 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
PPP4R3B-206ENST00000616407 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
PPP4R3B-206ENST00000616407 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
PPP4R3B-206ENST00000616407 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
PPP4R3B-206ENST00000616407 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
PPP4R3B-206ENST00000616407 FRAS1Q86XX4 4008 aa6.34□□□□□ -1.39
PPP4R3B-206ENST00000616407 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
PPP4R3B-206ENST00000616407 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
PPP4R3B-206ENST00000616407 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
PPP4R3B-206ENST00000616407 TNP1P09430 55 aa6.29□□□□□ -1.4
PPP4R3B-206ENST00000616407 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
PPP4R3B-206ENST00000616407 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
PPP4R3B-206ENST00000616407 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
PPP4R3B-206ENST00000616407 KIAA1109Q2LD37 5005 aa6.25□□□□□ -1.41
PPP4R3B-206ENST00000616407 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
PPP4R3B-206ENST00000616407 RYR1P21817 5038 aa6.23□□□□□ -1.41
PPP4R3B-206ENST00000616407 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
PPP4R3B-206ENST00000616407 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
PPP4R3B-206ENST00000616407 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
PPP4R3B-206ENST00000616407 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
PPP4R3B-206ENST00000616407 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
PPP4R3B-206ENST00000616407 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
PPP4R3B-206ENST00000616407 RYR3Q15413 4870 aa6.15□□□□□ -1.43
PPP4R3B-206ENST00000616407 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
PPP4R3B-206ENST00000616407 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
PPP4R3B-206ENST00000616407 RYR2Q92736 4967 aa6.11□□□□□ -1.43
PPP4R3B-206ENST00000616407 PKD1P98161 4303 aa6.02□□□□□ -1.45
PPP4R3B-206ENST00000616407 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
PPP4R3B-206ENST00000616407 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
PPP4R3B-206ENST00000616407 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
PPP4R3B-206ENST00000616407 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
PPP4R3B-206ENST00000616407 HSPG2P98160 4391 aa5.87□□□□□ -1.47
PPP4R3B-206ENST00000616407 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
PPP4R3B-206ENST00000616407 LRP2P98164 4655 aa5.82□□□□□ -1.48
PPP4R3B-206ENST00000616407 HERC2O95714 4834 aa5.79□□□□□ -1.48
PPP4R3B-206ENST00000616407 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
PPP4R3B-206ENST00000616407 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
PPP4R3B-206ENST00000616407 LPAP08519 4548 aa5.63□□□□□ -1.51
PPP4R3B-206ENST00000616407 TNXBP22105 4242 aa5.62□□□□□ -1.51
PPP4R3B-206ENST00000616407 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
PPP4R3B-206ENST00000616407 MT1HP80294 61 aa5.62□□□□□ -1.51
PPP4R3B-206ENST00000616407 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
PPP4R3B-206ENST00000616407 MT2AP02795 61 aa5.53□□□□□ -1.52
PPP4R3B-206ENST00000616407 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
PPP4R3B-206ENST00000616407 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
PPP4R3B-206ENST00000616407 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
PPP4R3B-206ENST00000616407 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
PPP4R3B-206ENST00000616407 MT1FP04733 61 aa5.48□□□□□ -1.53
PPP4R3B-206ENST00000616407 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
PPP4R3B-206ENST00000616407 HERC1Q15751 4861 aa5.4□□□□□ -1.55
PPP4R3B-206ENST00000616407 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
PPP4R3B-206ENST00000616407 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
PPP4R3B-206ENST00000616407 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
PPP4R3B-206ENST00000616407 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
PPP4R3B-206ENST00000616407 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
PPP4R3B-206ENST00000616407 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
PPP4R3B-206ENST00000616407 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
PPP4R3B-206ENST00000616407 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
PPP4R3B-206ENST00000616407 MUC2Q02817 5179 aa5.19□□□□□ -1.58
PPP4R3B-206ENST00000616407 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
PPP4R3B-206ENST00000616407 MT1BP07438 61 aa5.13□□□□□ -1.59
PPP4R3B-206ENST00000616407 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
PPP4R3B-206ENST00000616407 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
PPP4R3B-206ENST00000616407 MT1XP80297 61 aa5.09□□□□□ -1.59
PPP4R3B-206ENST00000616407 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
PPP4R3B-206ENST00000616407 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
PPP4R3B-206ENST00000616407 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
PPP4R3B-206ENST00000616407 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
PPP4R3B-206ENST00000616407 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
PPP4R3B-206ENST00000616407 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
PPP4R3B-206ENST00000616407 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
PPP4R3B-206ENST00000616407 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
PPP4R3B-206ENST00000616407 INE1O15225 51 aa4.97□□□□□ -1.61
PPP4R3B-206ENST00000616407 LCE2BO14633 110 aa4.89□□□□□ -1.63
PPP4R3B-206ENST00000616407 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
PPP4R3B-206ENST00000616407 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
PPP4R3B-206ENST00000616407 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
PPP4R3B-206ENST00000616407 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
PPP4R3B-206ENST00000616407 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
PPP4R3B-206ENST00000616407 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
PPP4R3B-206ENST00000616407 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
PPP4R3B-206ENST00000616407 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
PPP4R3B-206ENST00000616407 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
PPP4R3B-206ENST00000616407 MT1EP04732 61 aa4.49□□□□□ -1.69
PPP4R3B-206ENST00000616407 MT1LQ93083 61 aa4.49□□□□□ -1.69
PPP4R3B-206ENST00000616407 MT1GP13640 62 aa4.48□□□□□ -1.69
PPP4R3B-206ENST00000616407 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
PPP4R3B-206ENST00000616407 USH2AO75445 5202 aa4.45□□□□□ -1.7
PPP4R3B-206ENST00000616407 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
PPP4R3B-206ENST00000616407 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
PPP4R3B-206ENST00000616407 SPRR2EP22531 72 aa4.34□□□□□ -1.71
PPP4R3B-206ENST00000616407 SPRR2BP35325 72 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms