RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 TLN2Q9Y4G6 2542 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 LAMA5O15230 3695 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 DNAH12Q6ZR08 3092 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 XIRP2A4UGR9 3374 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 COL7A1Q02388 2944 aa0.74□□□□□ -2.29
NEAT1-205ENST00000616315 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
NEAT1-205ENST00000616315 VPS13AQ96RL7 3174 aa0.73□□□□□ -2.29
NEAT1-205ENST00000616315 DEFB135Q30KP9 77 aa0.73□□□□□ -2.29
NEAT1-205ENST00000616315 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
NEAT1-205ENST00000616315 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
NEAT1-205ENST00000616315 MTORP42345 2549 aa0.73□□□□□ -2.29
NEAT1-205ENST00000616315 LAMA3Q16787 3333 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 SZT2Q5T011 3432 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 SPART-AS1P0CW21 52 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 CELSR3Q9NYQ7 3312 aa0.72□□□□□ -2.29
NEAT1-205ENST00000616315 CFAP47Q6ZTR5 3102 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 TRRAPQ9Y4A5 3859 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 ITPR2Q14571 2701 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 DYNC2H1Q8NCM8 4307 aaKnown RBP0.71□□□□□ -2.3
NEAT1-205ENST00000616315 A0A096LNI7 61 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 H3BNG1 76 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 M0QZ58 72 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 HTN3P15516 51 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 LINC01556Q5JQF7 62 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 FREM2Q5SZK8 3169 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 WDFY4Q6ZS81 3184 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 CFAP46Q8IYW2 2715 aa0.71□□□□□ -2.3
NEAT1-205ENST00000616315 MKI67P46013 3256 aaKnown RBP0.7□□□□□ -2.3
NEAT1-205ENST00000616315 STAB1Q9NY15 2570 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 HUWE1Q7Z6Z7 4374 aaKnown RBP0.7□□□□□ -2.3
NEAT1-205ENST00000616315 UNC80Q8N2C7 3258 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
NEAT1-205ENST00000616315 ACANP16112 2415 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 CMYA5Q8N3K9 4069 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 MGAM2Q2M2H8 2515 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 DNAH6Q9C0G6 4158 aa0.7□□□□□ -2.3
NEAT1-205ENST00000616315 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
NEAT1-205ENST00000616315 DNAH14Q0VDD8 3507 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 TEX15Q9BXT5 2789 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 LAMA2P24043 3122 aaKnown RBP0.69□□□□□ -2.3
NEAT1-205ENST00000616315 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 ACACBO00763 2458 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 M0R2T5 61 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 DEFB4AO15263 64 aa0.69□□□□□ -2.3
NEAT1-205ENST00000616315 SMG1Q96Q15 3661 aaKnown RBP0.69□□□□□ -2.3
NEAT1-205ENST00000616315 VCANP13611 3396 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 SPTBN5Q9NRC6 3674 aaKnown RBP0.68□□□□□ -2.3
NEAT1-205ENST00000616315 FASNP49327 2511 aaKnown RBP0.68□□□□□ -2.3
NEAT1-205ENST00000616315 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 TGP01266 2768 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 DMDP11532 3685 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 USP34Q70CQ2 3546 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 CSMD1Q96PZ7 3565 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 SPEGQ15772 3267 aa0.68□□□□□ -2.3
NEAT1-205ENST00000616315 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
NEAT1-205ENST00000616315 BRCA2P51587 3418 aa0.67□□□□□ -2.3
NEAT1-205ENST00000616315 TNP1P09430 55 aa0.67□□□□□ -2.3
NEAT1-205ENST00000616315 DEFB124Q8NES8 71 aa0.67□□□□□ -2.3
NEAT1-205ENST00000616315 HRNRQ86YZ3 2850 aaPredicted RBP0.67□□□□□ -2.3
NEAT1-205ENST00000616315 CENPEQ02224 2701 aa0.67□□□□□ -2.3
NEAT1-205ENST00000616315 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
NEAT1-205ENST00000616315 TLN1Q9Y490 2541 aaKnown RBP0.67□□□□□ -2.3
NEAT1-205ENST00000616315 MAST4O15021 2626 aa0.67□□□□□ -2.3
NEAT1-205ENST00000616315 CDH23Q9H251 3354 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 DOPEY1Q5JWR5 2465 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 EP400Q96L91 3159 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 NBEAL1Q6ZS30 2694 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 PKHD1P08F94 4074 aa0.66□□□□□ -2.3
NEAT1-205ENST00000616315 FLNAP21333 2647 aaKnown RBP0.66□□□□□ -2.3
NEAT1-205ENST00000616315 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.3
NEAT1-205ENST00000616315 CUBNO60494 3623 aa0.65□□□□□ -2.3
NEAT1-205ENST00000616315 HSPG2P98160 4391 aa0.65□□□□□ -2.3
NEAT1-205ENST00000616315 DNAH1Q9P2D7 4330 aa0.65□□□□□ -2.31
NEAT1-205ENST00000616315 LAMA1P25391 3075 aa0.65□□□□□ -2.31
NEAT1-205ENST00000616315 CEP295Q9C0D2 2601 aa0.65□□□□□ -2.31
NEAT1-205ENST00000616315 SMR3AQ99954 134 aa0.65□□□□□ -2.31
NEAT1-205ENST00000616315 DNAH10Q8IVF4 4471 aa0.65□□□□□ -2.31
NEAT1-205ENST00000616315 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
NEAT1-205ENST00000616315 ADGRG4Q8IZF6 3080 aa0.64□□□□□ -2.31
NEAT1-205ENST00000616315 LOC400499M0QZD8 3231 aa0.64□□□□□ -2.31
NEAT1-205ENST00000616315 MYO9AB2RTY4 2548 aa0.64□□□□□ -2.31
NEAT1-205ENST00000616315 ASPMQ8IZT6 3477 aa0.63□□□□□ -2.31
NEAT1-205ENST00000616315 MYO15AQ9UKN7 3530 aa0.63□□□□□ -2.31
NEAT1-205ENST00000616315 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
NEAT1-205ENST00000616315 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
NEAT1-205ENST00000616315 PRM1P04553 51 aa0.62□□□□□ -2.31
NEAT1-205ENST00000616315 RPS29P62273 56 aaKnown RBP0.62□□□□□ -2.31
NEAT1-205ENST00000616315 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
NEAT1-205ENST00000616315 PLECQ15149 4684 aaKnown RBP0.61□□□□□ -2.31
NEAT1-205ENST00000616315 IGSF10Q6WRI0 2623 aa0.61□□□□□ -2.31
NEAT1-205ENST00000616315 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms