RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 PRR15LQ9BU68 103 aa9.15□□□□□ -0.95
GEN1-208ENST00000614478 Q5VV11 94 aa9.13□□□□□ -0.95
GEN1-208ENST00000614478 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
GEN1-208ENST00000614478 COX6B2Q6YFQ2 88 aa9.13□□□□□ -0.95
GEN1-208ENST00000614478 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
GEN1-208ENST00000614478 SPTSSBQ8NFR3 76 aa9.08□□□□□ -0.96
GEN1-208ENST00000614478 MUC17Q685J3 4493 aa9.06□□□□□ -0.96
GEN1-208ENST00000614478 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
GEN1-208ENST00000614478 BRK1Q8WUW1 75 aa9□□□□□ -0.97
GEN1-208ENST00000614478 MUC2Q02817 5179 aa8.99□□□□□ -0.97
GEN1-208ENST00000614478 A0A1B0GU69 56 aa8.97□□□□□ -0.97
GEN1-208ENST00000614478 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
GEN1-208ENST00000614478 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
GEN1-208ENST00000614478 A6NED7 52 aa8.92□□□□□ -0.98
GEN1-208ENST00000614478 A0A0A0MQY5 61 aa8.89□□□□□ -0.99
GEN1-208ENST00000614478 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
GEN1-208ENST00000614478 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
GEN1-208ENST00000614478 LCA10Q71F78 164 aa8.82□□□□□ -1
GEN1-208ENST00000614478 S4R3F8 94 aa8.82□□□□□ -1
GEN1-208ENST00000614478 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
GEN1-208ENST00000614478 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
GEN1-208ENST00000614478 UQCR11O14957 56 aa8.77□□□□□ -1.01
GEN1-208ENST00000614478 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
GEN1-208ENST00000614478 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
GEN1-208ENST00000614478 A8MU10 97 aa8.71□□□□□ -1.01
GEN1-208ENST00000614478 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
GEN1-208ENST00000614478 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
GEN1-208ENST00000614478 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
GEN1-208ENST00000614478 A0A1B0GU33 70 aa8.63□□□□□ -1.03
GEN1-208ENST00000614478 CSAG1Q6PB30 78 aa8.62□□□□□ -1.03
GEN1-208ENST00000614478 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
GEN1-208ENST00000614478 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
GEN1-208ENST00000614478 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
GEN1-208ENST00000614478 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
GEN1-208ENST00000614478 H0YAA0 97 aa8.51□□□□□ -1.05
GEN1-208ENST00000614478 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
GEN1-208ENST00000614478 A6NN06 94 aa8.48□□□□□ -1.05
GEN1-208ENST00000614478 MT1HP80294 61 aa8.48□□□□□ -1.05
GEN1-208ENST00000614478 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
GEN1-208ENST00000614478 P0C880 135 aa8.42□□□□□ -1.06
GEN1-208ENST00000614478 M0R2T5 61 aa8.37□□□□□ -1.07
GEN1-208ENST00000614478 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
GEN1-208ENST00000614478 M0QZ58 72 aa8.3□□□□□ -1.08
GEN1-208ENST00000614478 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
GEN1-208ENST00000614478 K7ERS5 55 aa8.28□□□□□ -1.08
GEN1-208ENST00000614478 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
GEN1-208ENST00000614478 A0A0D9SG42 100 aa8.15□□□□□ -1.1
GEN1-208ENST00000614478 R4GN34 69 aa8.14□□□□□ -1.11
GEN1-208ENST00000614478 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
GEN1-208ENST00000614478 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
GEN1-208ENST00000614478 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
GEN1-208ENST00000614478 MT2AP02795 61 aa8.02□□□□□ -1.13
GEN1-208ENST00000614478 KRTAP12-2P59991 146 aa8□□□□□ -1.13
GEN1-208ENST00000614478 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
GEN1-208ENST00000614478 MT1FP04733 61 aa7.96□□□□□ -1.14
GEN1-208ENST00000614478 ROMO1P60602 79 aa7.96□□□□□ -1.14
GEN1-208ENST00000614478 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
GEN1-208ENST00000614478 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
GEN1-208ENST00000614478 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.14
GEN1-208ENST00000614478 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
GEN1-208ENST00000614478 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
GEN1-208ENST00000614478 KRTAP9-3Q9BYQ3 159 aa7.83□□□□□ -1.16
GEN1-208ENST00000614478 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
GEN1-208ENST00000614478 LCE2BO14633 110 aa7.68□□□□□ -1.18
GEN1-208ENST00000614478 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
GEN1-208ENST00000614478 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
GEN1-208ENST00000614478 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
GEN1-208ENST00000614478 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
GEN1-208ENST00000614478 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
GEN1-208ENST00000614478 USH2AO75445 5202 aa7.58□□□□□ -1.2
GEN1-208ENST00000614478 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
GEN1-208ENST00000614478 MT1BP07438 61 aa7.53□□□□□ -1.2
GEN1-208ENST00000614478 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
GEN1-208ENST00000614478 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
GEN1-208ENST00000614478 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
GEN1-208ENST00000614478 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
GEN1-208ENST00000614478 TNP1P09430 55 aa7.34□□□□□ -1.23
GEN1-208ENST00000614478 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
GEN1-208ENST00000614478 MT1XP80297 61 aa7.31□□□□□ -1.24
GEN1-208ENST00000614478 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
GEN1-208ENST00000614478 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
GEN1-208ENST00000614478 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.25
GEN1-208ENST00000614478 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
GEN1-208ENST00000614478 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
GEN1-208ENST00000614478 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
GEN1-208ENST00000614478 NDUFAF8A1L188 74 aa7.15□□□□□ -1.27
GEN1-208ENST00000614478 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
GEN1-208ENST00000614478 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
GEN1-208ENST00000614478 LCE3AQ5TA76 89 aa6.96□□□□□ -1.29
GEN1-208ENST00000614478 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
GEN1-208ENST00000614478 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
GEN1-208ENST00000614478 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
GEN1-208ENST00000614478 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
GEN1-208ENST00000614478 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
GEN1-208ENST00000614478 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
GEN1-208ENST00000614478 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
GEN1-208ENST00000614478 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
GEN1-208ENST00000614478 KMT2DO14686 5537 aa6.69□□□□□ -1.34
GEN1-208ENST00000614478 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
GEN1-208ENST00000614478 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms