RNA–Protein interactions for RNA: ENST00000614337.4

KNL1-213, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 3,211 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-213ENST00000614337 VPS13BQ7Z7G8 4022 aa3.94□□□□□ -1.78
KNL1-213ENST00000614337 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
KNL1-213ENST00000614337 EPPK1P58107 5090 aaKnown RBP3.93□□□□□ -1.78
KNL1-213ENST00000614337 HECTD4Q9Y4D8 3996 aa3.92□□□□□ -1.78
KNL1-213ENST00000614337 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
KNL1-213ENST00000614337 RYR1P21817 5038 aa3.91□□□□□ -1.78
KNL1-213ENST00000614337 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.79
KNL1-213ENST00000614337 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
KNL1-213ENST00000614337 Q8N1X5 172 aa3.9□□□□□ -1.79
KNL1-213ENST00000614337 H1FX-AS1Q4G0G2 97 aa3.89□□□□□ -1.79
KNL1-213ENST00000614337 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
KNL1-213ENST00000614337 RYR2Q92736 4967 aa3.88□□□□□ -1.79
KNL1-213ENST00000614337 TYMSOSQ8TAI1 123 aa3.88□□□□□ -1.79
KNL1-213ENST00000614337 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
KNL1-213ENST00000614337 Q5VSD8 79 aa3.84□□□□□ -1.79
KNL1-213ENST00000614337 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
KNL1-213ENST00000614337 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
KNL1-213ENST00000614337 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
KNL1-213ENST00000614337 KRTAP4-5Q9BYR2 181 aa3.82□□□□□ -1.8
KNL1-213ENST00000614337 RPL37P61927 97 aaKnown RBP3.8□□□□□ -1.8
KNL1-213ENST00000614337 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
KNL1-213ENST00000614337 PKD1P98161 4303 aa3.79□□□□□ -1.8
KNL1-213ENST00000614337 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
KNL1-213ENST00000614337 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
KNL1-213ENST00000614337 A0A0D9SG42 100 aa3.76□□□□□ -1.81
KNL1-213ENST00000614337 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
KNL1-213ENST00000614337 HSPG2P98160 4391 aa3.74□□□□□ -1.81
KNL1-213ENST00000614337 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
KNL1-213ENST00000614337 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
KNL1-213ENST00000614337 HERC2O95714 4834 aa3.72□□□□□ -1.81
KNL1-213ENST00000614337 MUC2Q02817 5179 aa3.7□□□□□ -1.82
KNL1-213ENST00000614337 LRP2P98164 4655 aa3.7□□□□□ -1.82
KNL1-213ENST00000614337 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
KNL1-213ENST00000614337 HERC1Q15751 4861 aa3.69□□□□□ -1.82
KNL1-213ENST00000614337 LPAP08519 4548 aa3.67□□□□□ -1.82
KNL1-213ENST00000614337 RNF213Q63HN8 5207 aa3.65□□□□□ -1.82
KNL1-213ENST00000614337 KRTAP3-1Q9BYR8 98 aa3.65□□□□□ -1.83
KNL1-213ENST00000614337 S4R3F8 94 aa3.63□□□□□ -1.83
KNL1-213ENST00000614337 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
KNL1-213ENST00000614337 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
KNL1-213ENST00000614337 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
KNL1-213ENST00000614337 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
KNL1-213ENST00000614337 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
KNL1-213ENST00000614337 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
KNL1-213ENST00000614337 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
KNL1-213ENST00000614337 PKHD1L1Q86WI1 4243 aa3.56□□□□□ -1.84
KNL1-213ENST00000614337 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
KNL1-213ENST00000614337 XP32Q5T750 250 aa3.56□□□□□ -1.84
KNL1-213ENST00000614337 RPS29P62273 56 aaKnown RBP3.55□□□□□ -1.84
KNL1-213ENST00000614337 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
KNL1-213ENST00000614337 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
KNL1-213ENST00000614337 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
KNL1-213ENST00000614337 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
KNL1-213ENST00000614337 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
KNL1-213ENST00000614337 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
KNL1-213ENST00000614337 TNXBP22105 4242 aa3.46□□□□□ -1.86
KNL1-213ENST00000614337 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
KNL1-213ENST00000614337 M0QZ58 72 aa3.38□□□□□ -1.87
KNL1-213ENST00000614337 M0R2T5 61 aa3.36□□□□□ -1.87
KNL1-213ENST00000614337 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
KNL1-213ENST00000614337 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
KNL1-213ENST00000614337 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
KNL1-213ENST00000614337 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
KNL1-213ENST00000614337 R4GN34 69 aa3.27□□□□□ -1.89
KNL1-213ENST00000614337 USH2AO75445 5202 aa3.22□□□□□ -1.89
KNL1-213ENST00000614337 INE1O15225 51 aa3.2□□□□□ -1.9
KNL1-213ENST00000614337 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
KNL1-213ENST00000614337 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
KNL1-213ENST00000614337 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
KNL1-213ENST00000614337 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
KNL1-213ENST00000614337 TNP1P09430 55 aa3.08□□□□□ -1.92
KNL1-213ENST00000614337 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
KNL1-213ENST00000614337 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
KNL1-213ENST00000614337 MT1HP80294 61 aa3□□□□□ -1.93
KNL1-213ENST00000614337 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
KNL1-213ENST00000614337 KMT2DO14686 5537 aa2.99□□□□□ -1.93
KNL1-213ENST00000614337 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
KNL1-213ENST00000614337 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
KNL1-213ENST00000614337 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
KNL1-213ENST00000614337 MT1FP04733 61 aa2.94□□□□□ -1.94
KNL1-213ENST00000614337 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
KNL1-213ENST00000614337 MT2AP02795 61 aa2.9□□□□□ -1.94
KNL1-213ENST00000614337 KRTAP9-6A0A140TA67 174 aa2.9□□□□□ -1.95
KNL1-213ENST00000614337 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
KNL1-213ENST00000614337 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
KNL1-213ENST00000614337 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
KNL1-213ENST00000614337 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
KNL1-213ENST00000614337 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
KNL1-213ENST00000614337 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
KNL1-213ENST00000614337 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
KNL1-213ENST00000614337 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
KNL1-213ENST00000614337 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
KNL1-213ENST00000614337 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
KNL1-213ENST00000614337 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
KNL1-213ENST00000614337 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.97
KNL1-213ENST00000614337 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
KNL1-213ENST00000614337 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
KNL1-213ENST00000614337 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
KNL1-213ENST00000614337 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
KNL1-213ENST00000614337 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms