RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
SSX3-204ENST00000612497 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
SSX3-204ENST00000612497 BAALC-AS2P0C853 105 aa4.23□□□□□ -1.73
SSX3-204ENST00000612497 NREPQ16612 68 aa4.23□□□□□ -1.73
SSX3-204ENST00000612497 K7EQZ3 153 aa4.21□□□□□ -1.74
SSX3-204ENST00000612497 ATXN8Q156A1 80 aa4.21□□□□□ -1.74
SSX3-204ENST00000612497 C1orf64Q8NEQ6 169 aa4.19□□□□□ -1.74
SSX3-204ENST00000612497 CXCL6P80162 114 aa4.18□□□□□ -1.74
SSX3-204ENST00000612497 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SSX3-204ENST00000612497 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
SSX3-204ENST00000612497 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
SSX3-204ENST00000612497 K7ERJ3 54 aa4.17□□□□□ -1.74
SSX3-204ENST00000612497 UQCR10Q9UDW1 63 aa4.15□□□□□ -1.75
SSX3-204ENST00000612497 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SSX3-204ENST00000612497 A8MUN3 132 aa4.13□□□□□ -1.75
SSX3-204ENST00000612497 BPY2O14599 106 aa4.13□□□□□ -1.75
SSX3-204ENST00000612497 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
SSX3-204ENST00000612497 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
SSX3-204ENST00000612497 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
SSX3-204ENST00000612497 M0R143 59 aa4.1□□□□□ -1.75
SSX3-204ENST00000612497 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
SSX3-204ENST00000612497 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
SSX3-204ENST00000612497 MT4P47944 62 aa4.06□□□□□ -1.76
SSX3-204ENST00000612497 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
SSX3-204ENST00000612497 NAA38Q9BRA0 125 aaKnown RBP4.06□□□□□ -1.76
SSX3-204ENST00000612497 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
SSX3-204ENST00000612497 A0A087WVE0 104 aa4.04□□□□□ -1.76
SSX3-204ENST00000612497 H3BT86 120 aa4.04□□□□□ -1.76
SSX3-204ENST00000612497 H0YAA0 97 aa4.02□□□□□ -1.77
SSX3-204ENST00000612497 PYY3Q5JQD4 70 aa4.02□□□□□ -1.77
SSX3-204ENST00000612497 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
SSX3-204ENST00000612497 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
SSX3-204ENST00000612497 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
SSX3-204ENST00000612497 TSTD3H0UI37 97 aa4□□□□□ -1.77
SSX3-204ENST00000612497 UBL5Q9BZL1 73 aa4□□□□□ -1.77
SSX3-204ENST00000612497 C9orf118A6NHY6 69 aa3.98□□□□□ -1.77
SSX3-204ENST00000612497 Q8N9L7 120 aa3.98□□□□□ -1.77
SSX3-204ENST00000612497 NDUFC1O43677 76 aa3.96□□□□□ -1.78
SSX3-204ENST00000612497 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
SSX3-204ENST00000612497 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
SSX3-204ENST00000612497 R4GN34 69 aa3.95□□□□□ -1.78
SSX3-204ENST00000612497 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
SSX3-204ENST00000612497 LOC101927531A0A1B0GV80 90 aa3.92□□□□□ -1.78
SSX3-204ENST00000612497 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
SSX3-204ENST00000612497 M0QZ58 72 aa3.9□□□□□ -1.79
SSX3-204ENST00000612497 LINC01554Q52M75 96 aa3.9□□□□□ -1.79
SSX3-204ENST00000612497 CYP4F30PQ9H0H9 118 aa3.89□□□□□ -1.79
SSX3-204ENST00000612497 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
SSX3-204ENST00000612497 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
SSX3-204ENST00000612497 ATOX1O00244 68 aa3.87□□□□□ -1.79
SSX3-204ENST00000612497 ACYP1P07311 99 aa3.87□□□□□ -1.79
SSX3-204ENST00000612497 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
SSX3-204ENST00000612497 K7EP34 96 aa3.85□□□□□ -1.79
SSX3-204ENST00000612497 P0C880 135 aa3.84□□□□□ -1.79
SSX3-204ENST00000612497 MT1EP04732 61 aa3.83□□□□□ -1.8
SSX3-204ENST00000612497 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
SSX3-204ENST00000612497 SMIM6P0DI80 62 aa3.82□□□□□ -1.8
SSX3-204ENST00000612497 BATFQ16520 125 aa3.81□□□□□ -1.8
SSX3-204ENST00000612497 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
SSX3-204ENST00000612497 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
SSX3-204ENST00000612497 SPCS1Q9Y6A9 102 aa3.79□□□□□ -1.8
SSX3-204ENST00000612497 UQCRQO14949 82 aa3.78□□□□□ -1.8
SSX3-204ENST00000612497 MT1GP13640 62 aa3.76□□□□□ -1.81
SSX3-204ENST00000612497 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
SSX3-204ENST00000612497 TMA7Q9Y2S6 64 aaKnown RBP3.75□□□□□ -1.81
SSX3-204ENST00000612497 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
SSX3-204ENST00000612497 H0Y9P7 68 aa3.73□□□□□ -1.81
SSX3-204ENST00000612497 MT-ATP8P03928 68 aa3.7□□□□□ -1.82
SSX3-204ENST00000612497 MP68P56378 58 aa3.69□□□□□ -1.82
SSX3-204ENST00000612497 MT1MQ8N339 61 aa3.69□□□□□ -1.82
SSX3-204ENST00000612497 GTF2H5Q6ZYL4 71 aa3.67□□□□□ -1.82
SSX3-204ENST00000612497 F8W1H4 67 aa3.66□□□□□ -1.82
SSX3-204ENST00000612497 COL5A1-AS1Q5SY13 56 aa3.66□□□□□ -1.82
SSX3-204ENST00000612497 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SSX3-204ENST00000612497 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
SSX3-204ENST00000612497 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
SSX3-204ENST00000612497 H3BPC8 53 aa3.64□□□□□ -1.83
SSX3-204ENST00000612497 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
SSX3-204ENST00000612497 SPTSSBQ8NFR3 76 aa3.64□□□□□ -1.83
SSX3-204ENST00000612497 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
SSX3-204ENST00000612497 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
SSX3-204ENST00000612497 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
SSX3-204ENST00000612497 LINC00208Q96KT6 92 aa3.63□□□□□ -1.83
SSX3-204ENST00000612497 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
SSX3-204ENST00000612497 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
SSX3-204ENST00000612497 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
SSX3-204ENST00000612497 DMAC1Q96GE9 116 aa3.59□□□□□ -1.83
SSX3-204ENST00000612497 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
SSX3-204ENST00000612497 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
SSX3-204ENST00000612497 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
SSX3-204ENST00000612497 MT1LQ93083 61 aa3.57□□□□□ -1.84
SSX3-204ENST00000612497 A0A0D9SG42 100 aa3.54□□□□□ -1.84
SSX3-204ENST00000612497 LINC00643Q86TS7 51 aa3.53□□□□□ -1.84
SSX3-204ENST00000612497 ACYP2P14621 99 aa3.52□□□□□ -1.85
SSX3-204ENST00000612497 OCR1Q9BZK8 76 aa3.52□□□□□ -1.85
SSX3-204ENST00000612497 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
SSX3-204ENST00000612497 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
SSX3-204ENST00000612497 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
SSX3-204ENST00000612497 CHKB-CPT1BH3BT56 60 aa3.46□□□□□ -1.86
SSX3-204ENST00000612497 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms