RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 RYR2Q92736 4967 aa2.36□□□□□ -2.03
CENPE-208ENST00000611174 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
CENPE-208ENST00000611174 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.03
CENPE-208ENST00000611174 HUWE1Q7Z6Z7 4374 aaKnown RBP2.34□□□□□ -2.04
CENPE-208ENST00000611174 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
CENPE-208ENST00000611174 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
CENPE-208ENST00000611174 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
CENPE-208ENST00000611174 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 DNAH11Q96DT5 4516 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 FAT2Q9NYQ8 4349 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP12-2P59991 146 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
CENPE-208ENST00000611174 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP10-6P60371 365 aaPredicted RBP2.29□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP4-5Q9BYR2 181 aa2.29□□□□□ -2.04
CENPE-208ENST00000611174 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
CENPE-208ENST00000611174 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
CENPE-208ENST00000611174 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
CENPE-208ENST00000611174 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
CENPE-208ENST00000611174 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
CENPE-208ENST00000611174 DNAH6Q9C0G6 4158 aa2.25□□□□□ -2.05
CENPE-208ENST00000611174 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
CENPE-208ENST00000611174 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
CENPE-208ENST00000611174 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
CENPE-208ENST00000611174 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
CENPE-208ENST00000611174 LRP1BQ9NZR2 4599 aa2.23□□□□□ -2.05
CENPE-208ENST00000611174 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
CENPE-208ENST00000611174 ABCA13Q86UQ4 5058 aa2.22□□□□□ -2.05
CENPE-208ENST00000611174 KRTAP3-2Q9BYR7 98 aa2.22□□□□□ -2.05
CENPE-208ENST00000611174 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
CENPE-208ENST00000611174 PKD1P98161 4303 aa2.21□□□□□ -2.06
CENPE-208ENST00000611174 SACSQ9NZJ4 4579 aa2.21□□□□□ -2.06
CENPE-208ENST00000611174 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
CENPE-208ENST00000611174 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
CENPE-208ENST00000611174 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
CENPE-208ENST00000611174 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
CENPE-208ENST00000611174 LORP23490 312 aaPredicted RBP2.16□□□□□ -2.06
CENPE-208ENST00000611174 MUC2Q02817 5179 aa2.15□□□□□ -2.06
CENPE-208ENST00000611174 HERC1Q15751 4861 aa2.15□□□□□ -2.06
CENPE-208ENST00000611174 HSPG2P98160 4391 aa2.14□□□□□ -2.07
CENPE-208ENST00000611174 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
CENPE-208ENST00000611174 HERC2O95714 4834 aa2.14□□□□□ -2.07
CENPE-208ENST00000611174 LRP2P98164 4655 aa2.14□□□□□ -2.07
CENPE-208ENST00000611174 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
CENPE-208ENST00000611174 FAT4Q6V0I7 4981 aa2.13□□□□□ -2.07
CENPE-208ENST00000611174 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
CENPE-208ENST00000611174 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.07
CENPE-208ENST00000611174 KRTAP4-1Q9BYQ7 146 aa2.09□□□□□ -2.08
CENPE-208ENST00000611174 ALMS1Q8TCU4 4167 aa2.08□□□□□ -2.08
CENPE-208ENST00000611174 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
CENPE-208ENST00000611174 KRTAP15-1Q3LI76 137 aa2.06□□□□□ -2.08
CENPE-208ENST00000611174 KRTAP10-12P60413 245 aa2.01□□□□□ -2.09
CENPE-208ENST00000611174 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
CENPE-208ENST00000611174 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
CENPE-208ENST00000611174 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
CENPE-208ENST00000611174 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
CENPE-208ENST00000611174 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
CENPE-208ENST00000611174 SSPOA2VEC9 5147 aa1.97□□□□□ -2.09
CENPE-208ENST00000611174 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
CENPE-208ENST00000611174 KMT2DO14686 5537 aa1.95□□□□□ -2.1
CENPE-208ENST00000611174 MT2AP02795 61 aa1.95□□□□□ -2.1
CENPE-208ENST00000611174 MT1HP80294 61 aa1.93□□□□□ -2.1
CENPE-208ENST00000611174 MT1FP04733 61 aa1.93□□□□□ -2.1
CENPE-208ENST00000611174 LPAP08519 4548 aa1.91□□□□□ -2.1
CENPE-208ENST00000611174 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
CENPE-208ENST00000611174 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
CENPE-208ENST00000611174 TNXBP22105 4242 aa1.9□□□□□ -2.11
CENPE-208ENST00000611174 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
CENPE-208ENST00000611174 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
CENPE-208ENST00000611174 LCE2DQ5TA82 110 aaPredicted RBP1.88□□□□□ -2.11
CENPE-208ENST00000611174 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
CENPE-208ENST00000611174 KRTAP19-1Q8IUB9 90 aa1.88□□□□□ -2.11
CENPE-208ENST00000611174 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
CENPE-208ENST00000611174 USH2AO75445 5202 aa1.85□□□□□ -2.11
CENPE-208ENST00000611174 KRTAP23-1A1A580 65 aa1.85□□□□□ -2.11
CENPE-208ENST00000611174 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
CENPE-208ENST00000611174 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
CENPE-208ENST00000611174 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
CENPE-208ENST00000611174 INE1O15225 51 aa1.8□□□□□ -2.12
CENPE-208ENST00000611174 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
CENPE-208ENST00000611174 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
CENPE-208ENST00000611174 LCE2CQ5TA81 110 aa1.79□□□□□ -2.12
CENPE-208ENST00000611174 KRTAP4-8A0A0G2JLE6 195 aa1.78□□□□□ -2.12
CENPE-208ENST00000611174 KRTAP4-8Q9BYQ9 185 aa1.78□□□□□ -2.12
CENPE-208ENST00000611174 KRTAP9-8Q9BYQ0 159 aa1.78□□□□□ -2.12
CENPE-208ENST00000611174 MT1BP07438 61 aa1.78□□□□□ -2.13
CENPE-208ENST00000611174 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
CENPE-208ENST00000611174 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
CENPE-208ENST00000611174 MT1XP80297 61 aa1.76□□□□□ -2.13
CENPE-208ENST00000611174 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CENPE-208ENST00000611174 KRTAP19-2Q3LHN2 52 aa1.74□□□□□ -2.13
CENPE-208ENST00000611174 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
CENPE-208ENST00000611174 LCE3CQ5T5A8 94 aa1.72□□□□□ -2.13
CENPE-208ENST00000611174 KRTAP9-3Q9BYQ3 159 aa1.71□□□□□ -2.14
CENPE-208ENST00000611174 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms