RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 OCR1Q9BZK8 76 aa8.7□□□□□ -1.02
TCF3-219ENST00000610756 J3QR89 54 aa8.69□□□□□ -1.02
TCF3-219ENST00000610756 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
TCF3-219ENST00000610756 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
TCF3-219ENST00000610756 A8MUN3 132 aa8.65□□□□□ -1.02
TCF3-219ENST00000610756 MP68P56378 58 aa8.65□□□□□ -1.02
TCF3-219ENST00000610756 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
TCF3-219ENST00000610756 NDUFC1O43677 76 aa8.64□□□□□ -1.03
TCF3-219ENST00000610756 SYNE2Q8WXH0 6885 aaKnown RBP8.64□□□□□ -1.03
TCF3-219ENST00000610756 MT1BP07438 61 aa8.62□□□□□ -1.03
TCF3-219ENST00000610756 Q5VV11 94 aa8.62□□□□□ -1.03
TCF3-219ENST00000610756 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
TCF3-219ENST00000610756 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
TCF3-219ENST00000610756 H0YAA0 97 aa8.57□□□□□ -1.04
TCF3-219ENST00000610756 H3BPC8 53 aa8.55□□□□□ -1.04
TCF3-219ENST00000610756 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
TCF3-219ENST00000610756 A6NN06 94 aa8.51□□□□□ -1.05
TCF3-219ENST00000610756 KRTAP6-3Q3LI67 103 aa8.44□□□□□ -1.06
TCF3-219ENST00000610756 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
TCF3-219ENST00000610756 KRTAP10-5P60370 271 aa8.43□□□□□ -1.06
TCF3-219ENST00000610756 DMAC1Q96GE9 116 aa8.4□□□□□ -1.06
TCF3-219ENST00000610756 K7ERU9 68 aa8.37□□□□□ -1.07
TCF3-219ENST00000610756 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
TCF3-219ENST00000610756 SMIM20Q8N5G0 67 aa8.32□□□□□ -1.08
TCF3-219ENST00000610756 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
TCF3-219ENST00000610756 C20orf197Q8N268 126 aa8.27□□□□□ -1.09
TCF3-219ENST00000610756 P0C880 135 aa8.26□□□□□ -1.09
TCF3-219ENST00000610756 ACYP2P14621 99 aa8.24□□□□□ -1.09
TCF3-219ENST00000610756 R4GN34 69 aa8.24□□□□□ -1.09
TCF3-219ENST00000610756 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
TCF3-219ENST00000610756 PLAC4Q8WY50 150 aa8.17□□□□□ -1.1
TCF3-219ENST00000610756 M0QZ58 72 aa8.14□□□□□ -1.11
TCF3-219ENST00000610756 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
TCF3-219ENST00000610756 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
TCF3-219ENST00000610756 NEBP20929 6669 aa8.13□□□□□ -1.11
TCF3-219ENST00000610756 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
TCF3-219ENST00000610756 MT1XP80297 61 aa8.1□□□□□ -1.11
TCF3-219ENST00000610756 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
TCF3-219ENST00000610756 KRTAP5-9P26371 169 aa8.08□□□□□ -1.12
TCF3-219ENST00000610756 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
TCF3-219ENST00000610756 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
TCF3-219ENST00000610756 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
TCF3-219ENST00000610756 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
TCF3-219ENST00000610756 KMT2DO14686 5537 aa8.01□□□□□ -1.13
TCF3-219ENST00000610756 MDN1Q9NU22 5596 aa7.95□□□□□ -1.14
TCF3-219ENST00000610756 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
TCF3-219ENST00000610756 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
TCF3-219ENST00000610756 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
TCF3-219ENST00000610756 COX7CP15954 63 aa7.78□□□□□ -1.16
TCF3-219ENST00000610756 COA5Q86WW8 74 aa7.77□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP20-1Q3LI63 56 aa7.76□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP4-8A0A0G2JLE6 195 aa7.74□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
TCF3-219ENST00000610756 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
TCF3-219ENST00000610756 SPRR2EP22531 72 aa7.68□□□□□ -1.18
TCF3-219ENST00000610756 SPRR2BP35325 72 aa7.68□□□□□ -1.18
TCF3-219ENST00000610756 SPRR2AP35326 72 aa7.68□□□□□ -1.18
TCF3-219ENST00000610756 H7BZZ5 65 aa7.67□□□□□ -1.18
TCF3-219ENST00000610756 SEC61GP60059 68 aa7.64□□□□□ -1.19
TCF3-219ENST00000610756 CYSTM1Q9H1C7 97 aa7.63□□□□□ -1.19
TCF3-219ENST00000610756 SERP1Q9Y6X1 66 aa7.63□□□□□ -1.19
TCF3-219ENST00000610756 LCE1AQ5T7P2 110 aa7.62□□□□□ -1.19
TCF3-219ENST00000610756 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
TCF3-219ENST00000610756 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
TCF3-219ENST00000610756 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
TCF3-219ENST00000610756 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
TCF3-219ENST00000610756 PCP4P48539 62 aa7.52□□□□□ -1.2
TCF3-219ENST00000610756 A0A1B0GU33 70 aa7.52□□□□□ -1.21
TCF3-219ENST00000610756 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
TCF3-219ENST00000610756 A0A0D9SG42 100 aa7.48□□□□□ -1.21
TCF3-219ENST00000610756 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
TCF3-219ENST00000610756 SPRR2DP22532 72 aa7.42□□□□□ -1.22
TCF3-219ENST00000610756 A0A1B0GU69 56 aa7.38□□□□□ -1.23
TCF3-219ENST00000610756 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
TCF3-219ENST00000610756 KRTAP2-2Q9BYT5 123 aa7.37□□□□□ -1.23
TCF3-219ENST00000610756 KRTAP2-1Q9BYU5 128 aa7.37□□□□□ -1.23
TCF3-219ENST00000610756 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
TCF3-219ENST00000610756 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
TCF3-219ENST00000610756 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.24
TCF3-219ENST00000610756 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
TCF3-219ENST00000610756 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
TCF3-219ENST00000610756 A8MU10 97 aa7.21□□□□□ -1.26
TCF3-219ENST00000610756 TMEM258P61165 79 aa7.2□□□□□ -1.26
TCF3-219ENST00000610756 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
TCF3-219ENST00000610756 MT1EP04732 61 aa7.17□□□□□ -1.26
TCF3-219ENST00000610756 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
TCF3-219ENST00000610756 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
TCF3-219ENST00000610756 KRTAP19-3Q7Z4W3 81 aa7.11□□□□□ -1.27
TCF3-219ENST00000610756 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
TCF3-219ENST00000610756 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
TCF3-219ENST00000610756 DSTQ03001 7570 aaKnown RBP7.03□□□□□ -1.28
TCF3-219ENST00000610756 TNP1P09430 55 aa7.01□□□□□ -1.29
TCF3-219ENST00000610756 MT1GP13640 62 aa6.98□□□□□ -1.29
TCF3-219ENST00000610756 UQCR11O14957 56 aa6.96□□□□□ -1.3
TCF3-219ENST00000610756 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
TCF3-219ENST00000610756 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
TCF3-219ENST00000610756 PP632Q6XCG6 107 aa6.9□□□□□ -1.3
TCF3-219ENST00000610756 MT1LQ93083 61 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms