RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
TPM1-233ENST00000610733 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
TPM1-233ENST00000610733 ALMS1Q8TCU4 4167 aa4.93□□□□□ -1.62
TPM1-233ENST00000610733 XP32Q5T750 250 aa4.92□□□□□ -1.62
TPM1-233ENST00000610733 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
TPM1-233ENST00000610733 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
TPM1-233ENST00000610733 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
TPM1-233ENST00000610733 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
TPM1-233ENST00000610733 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
TPM1-233ENST00000610733 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
TPM1-233ENST00000610733 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
TPM1-233ENST00000610733 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
TPM1-233ENST00000610733 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
TPM1-233ENST00000610733 TPRXLQ17RH7 258 aa4.84□□□□□ -1.64
TPM1-233ENST00000610733 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
TPM1-233ENST00000610733 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
TPM1-233ENST00000610733 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
TPM1-233ENST00000610733 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
TPM1-233ENST00000610733 SACSQ9NZJ4 4579 aa4.75□□□□□ -1.65
TPM1-233ENST00000610733 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
TPM1-233ENST00000610733 KRTAP3-3Q9BYR6 98 aa4.74□□□□□ -1.65
TPM1-233ENST00000610733 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
TPM1-233ENST00000610733 M0R2T5 61 aa4.73□□□□□ -1.65
TPM1-233ENST00000610733 RYR1P21817 5038 aa4.72□□□□□ -1.65
TPM1-233ENST00000610733 KRTAP10-4P60372 401 aaPredicted RBP4.71□□□□□ -1.66
TPM1-233ENST00000610733 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
TPM1-233ENST00000610733 KRTAP3-2Q9BYR7 98 aa4.7□□□□□ -1.66
TPM1-233ENST00000610733 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
TPM1-233ENST00000610733 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.66
TPM1-233ENST00000610733 LRP2P98164 4655 aa4.64□□□□□ -1.67
TPM1-233ENST00000610733 RYR3Q15413 4870 aa4.6□□□□□ -1.67
TPM1-233ENST00000610733 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
TPM1-233ENST00000610733 KRTAP4-5Q9BYR2 181 aa4.59□□□□□ -1.67
TPM1-233ENST00000610733 HSPG2P98160 4391 aa4.58□□□□□ -1.68
TPM1-233ENST00000610733 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
TPM1-233ENST00000610733 PKD1P98161 4303 aa4.57□□□□□ -1.68
TPM1-233ENST00000610733 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
TPM1-233ENST00000610733 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
TPM1-233ENST00000610733 LPAP08519 4548 aa4.51□□□□□ -1.69
TPM1-233ENST00000610733 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
TPM1-233ENST00000610733 TNP1P09430 55 aa4.44□□□□□ -1.7
TPM1-233ENST00000610733 MUC2Q02817 5179 aa4.44□□□□□ -1.7
TPM1-233ENST00000610733 RYR2Q92736 4967 aa4.43□□□□□ -1.7
TPM1-233ENST00000610733 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
TPM1-233ENST00000610733 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
TPM1-233ENST00000610733 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
TPM1-233ENST00000610733 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
TPM1-233ENST00000610733 KRTAP10-10P60014 251 aa4.32□□□□□ -1.72
TPM1-233ENST00000610733 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
TPM1-233ENST00000610733 HERC2O95714 4834 aa4.27□□□□□ -1.73
TPM1-233ENST00000610733 TNXBP22105 4242 aa4.24□□□□□ -1.73
TPM1-233ENST00000610733 INE1O15225 51 aa4.24□□□□□ -1.73
TPM1-233ENST00000610733 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
TPM1-233ENST00000610733 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
TPM1-233ENST00000610733 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
TPM1-233ENST00000610733 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
TPM1-233ENST00000610733 HERC1Q15751 4861 aa4.13□□□□□ -1.75
TPM1-233ENST00000610733 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
TPM1-233ENST00000610733 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
TPM1-233ENST00000610733 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
TPM1-233ENST00000610733 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
TPM1-233ENST00000610733 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
TPM1-233ENST00000610733 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
TPM1-233ENST00000610733 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
TPM1-233ENST00000610733 LCE2BO14633 110 aa3.95□□□□□ -1.78
TPM1-233ENST00000610733 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
TPM1-233ENST00000610733 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
TPM1-233ENST00000610733 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
TPM1-233ENST00000610733 MT1FP04733 61 aa3.89□□□□□ -1.79
TPM1-233ENST00000610733 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
TPM1-233ENST00000610733 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
TPM1-233ENST00000610733 MT1HP80294 61 aa3.87□□□□□ -1.79
TPM1-233ENST00000610733 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
TPM1-233ENST00000610733 MT2AP02795 61 aa3.86□□□□□ -1.79
TPM1-233ENST00000610733 USH2AO75445 5202 aa3.84□□□□□ -1.79
TPM1-233ENST00000610733 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.8
TPM1-233ENST00000610733 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
TPM1-233ENST00000610733 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
TPM1-233ENST00000610733 KMT2DO14686 5537 aa3.78□□□□□ -1.8
TPM1-233ENST00000610733 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
TPM1-233ENST00000610733 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
TPM1-233ENST00000610733 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
TPM1-233ENST00000610733 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
TPM1-233ENST00000610733 MT1XP80297 61 aa3.66□□□□□ -1.82
TPM1-233ENST00000610733 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
TPM1-233ENST00000610733 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.82
TPM1-233ENST00000610733 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
TPM1-233ENST00000610733 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
TPM1-233ENST00000610733 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
TPM1-233ENST00000610733 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
TPM1-233ENST00000610733 MT1BP07438 61 aa3.64□□□□□ -1.83
TPM1-233ENST00000610733 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
TPM1-233ENST00000610733 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
TPM1-233ENST00000610733 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
TPM1-233ENST00000610733 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
TPM1-233ENST00000610733 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
TPM1-233ENST00000610733 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
TPM1-233ENST00000610733 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
TPM1-233ENST00000610733 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
TPM1-233ENST00000610733 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms