RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 KRTAP4-5Q9BYR2 181 aa14.54□□□□□ -0.08
CSPG5-205ENST00000610462 MIR22HGQ0VDD5 57 aa14.53□□□□□ -0.08
CSPG5-205ENST00000610462 SEC61GP60059 68 aa14.5□□□□□ -0.09
CSPG5-205ENST00000610462 TPRXLQ17RH7 258 aa14.48□□□□□ -0.09
CSPG5-205ENST00000610462 RBM12B-AS1Q9P1G2 102 aa14.26□□□□□ -0.13
CSPG5-205ENST00000610462 KRTAP3-3Q9BYR6 98 aa14.22□□□□□ -0.13
CSPG5-205ENST00000610462 S4R3F8 94 aa14.19□□□□□ -0.14
CSPG5-205ENST00000610462 LRP2P98164 4655 aa14.18□□□□□ -0.14
CSPG5-205ENST00000610462 ABCA13Q86UQ4 5058 aa14.16□□□□□ -0.14
CSPG5-205ENST00000610462 A0A1B0GU33 70 aa14.15□□□□□ -0.14
CSPG5-205ENST00000610462 H1FX-AS1Q4G0G2 97 aa14.13□□□□□ -0.15
CSPG5-205ENST00000610462 J3QL48 77 aa14.12□□□□□ -0.15
CSPG5-205ENST00000610462 LPAP08519 4548 aa14.11□□□□□ -0.15
CSPG5-205ENST00000610462 H0YAA0 97 aa14.11□□□□□ -0.15
CSPG5-205ENST00000610462 PRAC1Q96KF2 57 aa14.06□□□□□ -0.16
CSPG5-205ENST00000610462 ADM2Q7Z4H4 148 aa14.06□□□□□ -0.16
CSPG5-205ENST00000610462 SEC61BP60468 96 aaKnown RBP13.96□□□□□ -0.17
CSPG5-205ENST00000610462 HERC2O95714 4834 aa13.96□□□□□ -0.18
CSPG5-205ENST00000610462 KRTAP10-6P60371 365 aaPredicted RBP13.94□□□□□ -0.18
CSPG5-205ENST00000610462 BIRC6Q9NR09 4857 aa13.93□□□□□ -0.18
CSPG5-205ENST00000610462 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
CSPG5-205ENST00000610462 CSAG1Q6PB30 78 aa13.77□□□□□ -0.21
CSPG5-205ENST00000610462 MUC17Q685J3 4493 aa13.72□□□□□ -0.21
CSPG5-205ENST00000610462 P0C880 135 aa13.71□□□□□ -0.21
CSPG5-205ENST00000610462 KRTAP4-1Q9BYQ7 146 aa13.69□□□□□ -0.22
CSPG5-205ENST00000610462 KRTAP13-4Q3LI77 160 aa13.67□□□□□ -0.22
CSPG5-205ENST00000610462 K7ERS5 55 aa13.61□□□□□ -0.23
CSPG5-205ENST00000610462 LINC01554Q52M75 96 aa13.57□□□□□ -0.24
CSPG5-205ENST00000610462 A0A0D9SG42 100 aa13.48□□□□□ -0.25
CSPG5-205ENST00000610462 KRTAP19-2Q3LHN2 52 aa13.43□□□□□ -0.26
CSPG5-205ENST00000610462 KRTAP25-1Q3LHN0 102 aa13.38□□□□□ -0.27
CSPG5-205ENST00000610462 M0QZ58 72 aa13.36□□□□□ -0.27
CSPG5-205ENST00000610462 PCLOQ9Y6V0 5065 aa13.29□□□□□ -0.28
CSPG5-205ENST00000610462 ROMO1P60602 79 aa13.27□□□□□ -0.28
CSPG5-205ENST00000610462 HERC1Q15751 4861 aa13.19□□□□□ -0.3
CSPG5-205ENST00000610462 HMCN2Q8NDA2 5059 aa13.19□□□□□ -0.3
CSPG5-205ENST00000610462 KRTAP12-2P59991 146 aa13.19□□□□□ -0.3
CSPG5-205ENST00000610462 KRTAP12-1P59990 96 aa13.17□□□□□ -0.3
CSPG5-205ENST00000610462 CRIPTQ9P021 101 aa13.16□□□□□ -0.3
CSPG5-205ENST00000610462 R4GN34 69 aa13.11□□□□□ -0.31
CSPG5-205ENST00000610462 SPINT4Q6UDR6 99 aa13.1□□□□□ -0.31
CSPG5-205ENST00000610462 LORP23490 312 aaPredicted RBP13.03□□□□□ -0.32
CSPG5-205ENST00000610462 FLGP20930 4061 aaPredicted RBP13.02□□□□□ -0.33
CSPG5-205ENST00000610462 MUC2Q02817 5179 aa13□□□□□ -0.33
CSPG5-205ENST00000610462 LCE2CQ5TA81 110 aa12.83□□□□□ -0.36
CSPG5-205ENST00000610462 C10orf95Q9H7T3 257 aa12.75□□□□□ -0.37
CSPG5-205ENST00000610462 RNF213Q63HN8 5207 aa12.55□□□□□ -0.4
CSPG5-205ENST00000610462 MT1HP80294 61 aa12.52□□□□□ -0.41
CSPG5-205ENST00000610462 M0R2T5 61 aa12.46□□□□□ -0.41
CSPG5-205ENST00000610462 FAT4Q6V0I7 4981 aa12.46□□□□□ -0.42
CSPG5-205ENST00000610462 UBR4Q5T4S7 5183 aa12.45□□□□□ -0.42
CSPG5-205ENST00000610462 CAMK2N1Q7Z7J9 78 aa12.37□□□□□ -0.43
CSPG5-205ENST00000610462 SPRR2GQ9BYE4 73 aa12.28□□□□□ -0.44
CSPG5-205ENST00000610462 KRTAP19-1Q8IUB9 90 aa12.2□□□□□ -0.46
CSPG5-205ENST00000610462 MT2AP02795 61 aa12.19□□□□□ -0.46
CSPG5-205ENST00000610462 KRTAP9-8Q9BYQ0 159 aa12.16□□□□□ -0.46
CSPG5-205ENST00000610462 MT1FP04733 61 aa12.15□□□□□ -0.46
CSPG5-205ENST00000610462 KRTAP15-1Q3LI76 137 aa12.15□□□□□ -0.46
CSPG5-205ENST00000610462 KRTAP10-10P60014 251 aa12.12□□□□□ -0.47
CSPG5-205ENST00000610462 H3BS24 57 aa12.11□□□□□ -0.47
CSPG5-205ENST00000610462 PLAC4Q8WY50 150 aa12.03□□□□□ -0.48
CSPG5-205ENST00000610462 PP632Q6XCG6 107 aa11.89□□□□□ -0.51
CSPG5-205ENST00000610462 TNP1P09430 55 aa11.88□□□□□ -0.51
CSPG5-205ENST00000610462 KRTAP19-8Q3LI54 63 aa11.84□□□□□ -0.51
CSPG5-205ENST00000610462 NDUFAF8A1L188 74 aa11.75□□□□□ -0.53
CSPG5-205ENST00000610462 KRTAP23-1A1A580 65 aa11.69□□□□□ -0.54
CSPG5-205ENST00000610462 KRTAP9-3Q9BYQ3 159 aa11.69□□□□□ -0.54
CSPG5-205ENST00000610462 MT1BP07438 61 aa11.66□□□□□ -0.54
CSPG5-205ENST00000610462 LCE2AQ5TA79 106 aaPredicted RBP11.49□□□□□ -0.57
CSPG5-205ENST00000610462 KRTAP10-5P60370 271 aa11.44□□□□□ -0.58
CSPG5-205ENST00000610462 MT1XP80297 61 aa11.44□□□□□ -0.58
CSPG5-205ENST00000610462 LCE3AQ5TA76 89 aa11.29□□□□□ -0.6
CSPG5-205ENST00000610462 LCE2BO14633 110 aa11.26□□□□□ -0.61
CSPG5-205ENST00000610462 PRO2289Q9P1D8 64 aa11.16□□□□□ -0.62
CSPG5-205ENST00000610462 LUZP6Q538Z0 58 aa11.13□□□□□ -0.63
CSPG5-205ENST00000610462 KRTAP10-12P60413 245 aa11.06□□□□□ -0.64
CSPG5-205ENST00000610462 KRTAP8-1Q8IUC2 63 aa11.05□□□□□ -0.64
CSPG5-205ENST00000610462 KRTAP10-7P60409 375 aaPredicted RBP11.04□□□□□ -0.64
CSPG5-205ENST00000610462 SPRR5A0A1B0GTR4 108 aa10.97□□□□□ -0.65
CSPG5-205ENST00000610462 KRTAP12-3P60328 96 aa10.79□□□□□ -0.68
CSPG5-205ENST00000610462 USH2AO75445 5202 aa10.74□□□□□ -0.69
CSPG5-205ENST00000610462 KRTAP19-5Q3LI72 72 aa10.51□□□□□ -0.73
CSPG5-205ENST00000610462 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
CSPG5-205ENST00000610462 KRTAP4-8A0A0G2JLE6 195 aa10.45□□□□□ -0.74
CSPG5-205ENST00000610462 KRTAP4-8Q9BYQ9 185 aa10.45□□□□□ -0.74
CSPG5-205ENST00000610462 SSPOA2VEC9 5147 aa10.4□□□□□ -0.74
CSPG5-205ENST00000610462 KRTAP19-6Q3LI70 58 aa10.35□□□□□ -0.75
CSPG5-205ENST00000610462 KMT2DO14686 5537 aa10.31□□□□□ -0.76
CSPG5-205ENST00000610462 KRTAP19-7Q3SYF9 63 aa10.2□□□□□ -0.78
CSPG5-205ENST00000610462 LCE3CQ5T5A8 94 aa10.14□□□□□ -0.79
CSPG5-205ENST00000610462 LCE2DQ5TA82 110 aaPredicted RBP10.14□□□□□ -0.79
CSPG5-205ENST00000610462 MT1EP04732 61 aa9.96□□□□□ -0.81
CSPG5-205ENST00000610462 KRTAP19-4Q3LI73 84 aa9.91□□□□□ -0.82
CSPG5-205ENST00000610462 FSIP2Q5CZC0 6907 aa9.9□□□□□ -0.82
CSPG5-205ENST00000610462 MT1LQ93083 61 aa9.87□□□□□ -0.83
CSPG5-205ENST00000610462 KRTAP4-7Q9BYR0 210 aa9.73□□□□□ -0.85
CSPG5-205ENST00000610462 FCGBPQ9Y6R7 5405 aaPredicted RBP9.72□□□□□ -0.85
CSPG5-205ENST00000610462 KRTAP9-6A8MVA2 160 aa9.67□□□□□ -0.86
CSPG5-205ENST00000610462 KRTAP9-2Q9BYQ4 174 aa9.55□□□□□ -0.88
CSPG5-205ENST00000610462 INE1O15225 51 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms