RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
USP6NL-206ENST00000609853 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
USP6NL-206ENST00000609853 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
USP6NL-206ENST00000609853 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
USP6NL-206ENST00000609853 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
USP6NL-206ENST00000609853 SPINK7P58062 85 aa6.39□□□□□ -1.39
USP6NL-206ENST00000609853 A6NED7 52 aa6.39□□□□□ -1.39
USP6NL-206ENST00000609853 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
USP6NL-206ENST00000609853 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
USP6NL-206ENST00000609853 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
USP6NL-206ENST00000609853 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
USP6NL-206ENST00000609853 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
USP6NL-206ENST00000609853 A0A1B0GU69 56 aa6.34□□□□□ -1.39
USP6NL-206ENST00000609853 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
USP6NL-206ENST00000609853 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
USP6NL-206ENST00000609853 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
USP6NL-206ENST00000609853 LCA10Q71F78 164 aa6.3□□□□□ -1.4
USP6NL-206ENST00000609853 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
USP6NL-206ENST00000609853 SEC61GP60059 68 aa6.26□□□□□ -1.41
USP6NL-206ENST00000609853 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
USP6NL-206ENST00000609853 TPRXLQ17RH7 258 aa6.24□□□□□ -1.41
USP6NL-206ENST00000609853 A8MU10 97 aa6.22□□□□□ -1.41
USP6NL-206ENST00000609853 UQCR11O14957 56 aa6.22□□□□□ -1.41
USP6NL-206ENST00000609853 HERC1Q15751 4861 aa6.2□□□□□ -1.42
USP6NL-206ENST00000609853 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
USP6NL-206ENST00000609853 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
USP6NL-206ENST00000609853 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
USP6NL-206ENST00000609853 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
USP6NL-206ENST00000609853 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
USP6NL-206ENST00000609853 A6NN06 94 aa6.11□□□□□ -1.43
USP6NL-206ENST00000609853 S4R3F8 94 aa6.08□□□□□ -1.44
USP6NL-206ENST00000609853 A0A1B0GU33 70 aa6.06□□□□□ -1.44
USP6NL-206ENST00000609853 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
USP6NL-206ENST00000609853 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
USP6NL-206ENST00000609853 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
USP6NL-206ENST00000609853 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
USP6NL-206ENST00000609853 LRP2P98164 4655 aa6.02□□□□□ -1.45
USP6NL-206ENST00000609853 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
USP6NL-206ENST00000609853 H0YAA0 97 aa5.99□□□□□ -1.45
USP6NL-206ENST00000609853 H3BS24 57 aa5.98□□□□□ -1.45
USP6NL-206ENST00000609853 LPAP08519 4548 aa5.94□□□□□ -1.46
USP6NL-206ENST00000609853 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
USP6NL-206ENST00000609853 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
USP6NL-206ENST00000609853 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
USP6NL-206ENST00000609853 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
USP6NL-206ENST00000609853 K7ERS5 55 aa5.88□□□□□ -1.47
USP6NL-206ENST00000609853 UBR4Q5T4S7 5183 aa5.86□□□□□ -1.47
USP6NL-206ENST00000609853 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
USP6NL-206ENST00000609853 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
USP6NL-206ENST00000609853 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
USP6NL-206ENST00000609853 P0C880 135 aa5.82□□□□□ -1.48
USP6NL-206ENST00000609853 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
USP6NL-206ENST00000609853 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
USP6NL-206ENST00000609853 M0QZ58 72 aa5.77□□□□□ -1.49
USP6NL-206ENST00000609853 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
USP6NL-206ENST00000609853 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
USP6NL-206ENST00000609853 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
USP6NL-206ENST00000609853 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
USP6NL-206ENST00000609853 A0A0D9SG42 100 aa5.71□□□□□ -1.5
USP6NL-206ENST00000609853 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.5
USP6NL-206ENST00000609853 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
USP6NL-206ENST00000609853 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
USP6NL-206ENST00000609853 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
USP6NL-206ENST00000609853 ROMO1P60602 79 aa5.65□□□□□ -1.51
USP6NL-206ENST00000609853 R4GN34 69 aa5.62□□□□□ -1.51
USP6NL-206ENST00000609853 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
USP6NL-206ENST00000609853 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
USP6NL-206ENST00000609853 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
USP6NL-206ENST00000609853 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
USP6NL-206ENST00000609853 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
USP6NL-206ENST00000609853 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
USP6NL-206ENST00000609853 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
USP6NL-206ENST00000609853 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
USP6NL-206ENST00000609853 MUC2Q02817 5179 aa5.49□□□□□ -1.53
USP6NL-206ENST00000609853 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
USP6NL-206ENST00000609853 M0R2T5 61 aa5.32□□□□□ -1.56
USP6NL-206ENST00000609853 MT1HP80294 61 aa5.32□□□□□ -1.56
USP6NL-206ENST00000609853 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
USP6NL-206ENST00000609853 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
USP6NL-206ENST00000609853 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
USP6NL-206ENST00000609853 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
USP6NL-206ENST00000609853 MT2AP02795 61 aa5.19□□□□□ -1.58
USP6NL-206ENST00000609853 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
USP6NL-206ENST00000609853 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
USP6NL-206ENST00000609853 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
USP6NL-206ENST00000609853 MT1FP04733 61 aa5.15□□□□□ -1.58
USP6NL-206ENST00000609853 TNP1P09430 55 aa5.11□□□□□ -1.59
USP6NL-206ENST00000609853 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
USP6NL-206ENST00000609853 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
USP6NL-206ENST00000609853 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
USP6NL-206ENST00000609853 MT1BP07438 61 aa4.95□□□□□ -1.62
USP6NL-206ENST00000609853 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
USP6NL-206ENST00000609853 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
USP6NL-206ENST00000609853 MT1XP80297 61 aa4.86□□□□□ -1.63
USP6NL-206ENST00000609853 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
USP6NL-206ENST00000609853 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
USP6NL-206ENST00000609853 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
USP6NL-206ENST00000609853 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
USP6NL-206ENST00000609853 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
USP6NL-206ENST00000609853 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms