RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
CTCFL-214ENST00000608108 H3BPC8 53 aa5.77□□□□□ -1.48
CTCFL-214ENST00000608108 COX7CP15954 63 aa5.77□□□□□ -1.48
CTCFL-214ENST00000608108 CYP4F30PQ9H0H9 118 aa5.76□□□□□ -1.49
CTCFL-214ENST00000608108 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
CTCFL-214ENST00000608108 A0A0U1RQV1 116 aa5.74□□□□□ -1.49
CTCFL-214ENST00000608108 SNURFQ9Y675 71 aa5.74□□□□□ -1.49
CTCFL-214ENST00000608108 HRES1P13985 223 aa5.72□□□□□ -1.49
CTCFL-214ENST00000608108 KLKP1Q107X0 134 aa5.7□□□□□ -1.5
CTCFL-214ENST00000608108 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
CTCFL-214ENST00000608108 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
CTCFL-214ENST00000608108 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
CTCFL-214ENST00000608108 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
CTCFL-214ENST00000608108 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
CTCFL-214ENST00000608108 CYSTM1Q9H1C7 97 aa5.64□□□□□ -1.51
CTCFL-214ENST00000608108 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
CTCFL-214ENST00000608108 FAM236DA0A1B0GTK5 79 aa5.63□□□□□ -1.51
CTCFL-214ENST00000608108 FAM236CP0DP71 79 aa5.63□□□□□ -1.51
CTCFL-214ENST00000608108 NDUFC1O43677 76 aa5.62□□□□□ -1.51
CTCFL-214ENST00000608108 TMEM258P61165 79 aa5.62□□□□□ -1.51
CTCFL-214ENST00000608108 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
CTCFL-214ENST00000608108 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
CTCFL-214ENST00000608108 H7BZZ5 65 aa5.59□□□□□ -1.51
CTCFL-214ENST00000608108 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
CTCFL-214ENST00000608108 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
CTCFL-214ENST00000608108 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
CTCFL-214ENST00000608108 A8MUN3 132 aa5.55□□□□□ -1.52
CTCFL-214ENST00000608108 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
CTCFL-214ENST00000608108 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
CTCFL-214ENST00000608108 ACYP2P14621 99 aa5.48□□□□□ -1.53
CTCFL-214ENST00000608108 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
CTCFL-214ENST00000608108 S4R3F8 94 aa5.47□□□□□ -1.53
CTCFL-214ENST00000608108 MT1HP80294 61 aa5.46□□□□□ -1.54
CTCFL-214ENST00000608108 LCA10Q71F78 164 aa5.44□□□□□ -1.54
CTCFL-214ENST00000608108 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
CTCFL-214ENST00000608108 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
CTCFL-214ENST00000608108 M0R2T5 61 aa5.41□□□□□ -1.54
CTCFL-214ENST00000608108 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
CTCFL-214ENST00000608108 COA5Q86WW8 74 aa5.4□□□□□ -1.55
CTCFL-214ENST00000608108 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
CTCFL-214ENST00000608108 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
CTCFL-214ENST00000608108 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
CTCFL-214ENST00000608108 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
CTCFL-214ENST00000608108 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
CTCFL-214ENST00000608108 V9GYY9 64 aa5.23□□□□□ -1.57
CTCFL-214ENST00000608108 H0YAA0 97 aa5.22□□□□□ -1.57
CTCFL-214ENST00000608108 SEC61GP60059 68 aa5.21□□□□□ -1.58
CTCFL-214ENST00000608108 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
CTCFL-214ENST00000608108 MT2AP02795 61 aa5.19□□□□□ -1.58
CTCFL-214ENST00000608108 MT1FP04733 61 aa5.16□□□□□ -1.58
CTCFL-214ENST00000608108 Q1T7F1 81 aa5.16□□□□□ -1.58
CTCFL-214ENST00000608108 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
CTCFL-214ENST00000608108 P0C880 135 aa5.14□□□□□ -1.59
CTCFL-214ENST00000608108 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
CTCFL-214ENST00000608108 A0A1B0GU69 56 aa5.12□□□□□ -1.59
CTCFL-214ENST00000608108 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
CTCFL-214ENST00000608108 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CTCFL-214ENST00000608108 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CTCFL-214ENST00000608108 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
CTCFL-214ENST00000608108 R4GN34 69 aa5.04□□□□□ -1.6
CTCFL-214ENST00000608108 M0QZ58 72 aa5.02□□□□□ -1.61
CTCFL-214ENST00000608108 PSPHP1O15172 72 aa5.02□□□□□ -1.61
CTCFL-214ENST00000608108 A0A1B0GU33 70 aa5.01□□□□□ -1.61
CTCFL-214ENST00000608108 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
CTCFL-214ENST00000608108 Q5VV11 94 aa4.99□□□□□ -1.61
CTCFL-214ENST00000608108 USH2AO75445 5202 aa4.98□□□□□ -1.61
CTCFL-214ENST00000608108 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
CTCFL-214ENST00000608108 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
CTCFL-214ENST00000608108 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
CTCFL-214ENST00000608108 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
CTCFL-214ENST00000608108 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
CTCFL-214ENST00000608108 UQCR11O14957 56 aa4.92□□□□□ -1.62
CTCFL-214ENST00000608108 A0A0D9SG42 100 aa4.88□□□□□ -1.63
CTCFL-214ENST00000608108 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
CTCFL-214ENST00000608108 A6NED7 52 aa4.87□□□□□ -1.63
CTCFL-214ENST00000608108 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
CTCFL-214ENST00000608108 A8MU10 97 aa4.85□□□□□ -1.63
CTCFL-214ENST00000608108 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
CTCFL-214ENST00000608108 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
CTCFL-214ENST00000608108 A6NN06 94 aa4.84□□□□□ -1.63
CTCFL-214ENST00000608108 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
CTCFL-214ENST00000608108 MT1BP07438 61 aa4.83□□□□□ -1.64
CTCFL-214ENST00000608108 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
CTCFL-214ENST00000608108 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
CTCFL-214ENST00000608108 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
CTCFL-214ENST00000608108 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
CTCFL-214ENST00000608108 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
CTCFL-214ENST00000608108 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CTCFL-214ENST00000608108 K7ERS5 55 aa4.68□□□□□ -1.66
CTCFL-214ENST00000608108 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
CTCFL-214ENST00000608108 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
CTCFL-214ENST00000608108 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
CTCFL-214ENST00000608108 MT1XP80297 61 aa4.65□□□□□ -1.66
CTCFL-214ENST00000608108 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
CTCFL-214ENST00000608108 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
CTCFL-214ENST00000608108 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
CTCFL-214ENST00000608108 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
CTCFL-214ENST00000608108 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
CTCFL-214ENST00000608108 KMT2DO14686 5537 aa4.47□□□□□ -1.69
CTCFL-214ENST00000608108 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms