RNA–Protein interactions for RNA: ENST00000607016.1

NUDT3-201, Transcript of nudix hydrolase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDT3, Length 9,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDT3-201ENST00000607016 LYSTQ99698 3801 aa5.43□□□□□ -1.54
NUDT3-201ENST00000607016 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.55
NUDT3-201ENST00000607016 ZNF469Q96JG9 3925 aaPredicted RBP5.31□□□□□ -1.56
NUDT3-201ENST00000607016 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
NUDT3-201ENST00000607016 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
NUDT3-201ENST00000607016 ANK3Q12955 4377 aaKnown RBP5.22□□□□□ -1.57
NUDT3-201ENST00000607016 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
NUDT3-201ENST00000607016 ANK2Q01484 3957 aa5.21□□□□□ -1.58
NUDT3-201ENST00000607016 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
NUDT3-201ENST00000607016 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
NUDT3-201ENST00000607016 FRAS1Q86XX4 4008 aa5.19□□□□□ -1.58
NUDT3-201ENST00000607016 HUWE1Q7Z6Z7 4374 aaKnown RBP5.18□□□□□ -1.58
NUDT3-201ENST00000607016 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
NUDT3-201ENST00000607016 CMYA5Q8N3K9 4069 aa5.14□□□□□ -1.59
NUDT3-201ENST00000607016 DNAH3Q8TD57 4116 aa5.12□□□□□ -1.59
NUDT3-201ENST00000607016 DNAH7Q8WXX0 4024 aa5.09□□□□□ -1.59
NUDT3-201ENST00000607016 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.6
NUDT3-201ENST00000607016 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
NUDT3-201ENST00000607016 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
NUDT3-201ENST00000607016 KMT2AQ03164 3969 aa5.02□□□□□ -1.61
NUDT3-201ENST00000607016 KRTAP12-4P60329 112 aa5□□□□□ -1.61
NUDT3-201ENST00000607016 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
NUDT3-201ENST00000607016 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.61
NUDT3-201ENST00000607016 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
NUDT3-201ENST00000607016 DNAH6Q9C0G6 4158 aa4.93□□□□□ -1.62
NUDT3-201ENST00000607016 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
NUDT3-201ENST00000607016 DNAH10Q8IVF4 4471 aa4.88□□□□□ -1.63
NUDT3-201ENST00000607016 MT1HP80294 61 aa4.88□□□□□ -1.63
NUDT3-201ENST00000607016 MT2AP02795 61 aa4.86□□□□□ -1.63
NUDT3-201ENST00000607016 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
NUDT3-201ENST00000607016 MT1FP04733 61 aa4.81□□□□□ -1.64
NUDT3-201ENST00000607016 MT1GP13640 62 aa4.77□□□□□ -1.65
NUDT3-201ENST00000607016 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
NUDT3-201ENST00000607016 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.66
NUDT3-201ENST00000607016 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
NUDT3-201ENST00000607016 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
NUDT3-201ENST00000607016 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
NUDT3-201ENST00000607016 FAT2Q9NYQ8 4349 aa4.58□□□□□ -1.68
NUDT3-201ENST00000607016 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
NUDT3-201ENST00000607016 SPRR2EP22531 72 aa4.56□□□□□ -1.68
NUDT3-201ENST00000607016 SPRR2BP35325 72 aa4.56□□□□□ -1.68
NUDT3-201ENST00000607016 SPRR2AP35326 72 aa4.56□□□□□ -1.68
NUDT3-201ENST00000607016 MT1XP80297 61 aa4.54□□□□□ -1.68
NUDT3-201ENST00000607016 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
NUDT3-201ENST00000607016 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
NUDT3-201ENST00000607016 PRKDCP78527 4128 aaKnown RBP4.53□□□□□ -1.68
NUDT3-201ENST00000607016 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
NUDT3-201ENST00000607016 PRM1P04553 51 aa4.51□□□□□ -1.69
NUDT3-201ENST00000607016 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
NUDT3-201ENST00000607016 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
NUDT3-201ENST00000607016 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
NUDT3-201ENST00000607016 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
NUDT3-201ENST00000607016 DYNC2H1Q8NCM8 4307 aaKnown RBP4.46□□□□□ -1.7
NUDT3-201ENST00000607016 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
NUDT3-201ENST00000607016 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
NUDT3-201ENST00000607016 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.7
NUDT3-201ENST00000607016 SPRR2DP22532 72 aa4.4□□□□□ -1.71
NUDT3-201ENST00000607016 LCE2BO14633 110 aa4.4□□□□□ -1.71
NUDT3-201ENST00000607016 FAT1Q14517 4588 aa4.38□□□□□ -1.71
NUDT3-201ENST00000607016 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
NUDT3-201ENST00000607016 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
NUDT3-201ENST00000607016 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
NUDT3-201ENST00000607016 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
NUDT3-201ENST00000607016 MT1BP07438 61 aa4.27□□□□□ -1.73
NUDT3-201ENST00000607016 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
NUDT3-201ENST00000607016 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
NUDT3-201ENST00000607016 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
NUDT3-201ENST00000607016 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
NUDT3-201ENST00000607016 MT1LQ93083 61 aa4.17□□□□□ -1.74
NUDT3-201ENST00000607016 PKD1P98161 4303 aa4.16□□□□□ -1.74
NUDT3-201ENST00000607016 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
NUDT3-201ENST00000607016 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
NUDT3-201ENST00000607016 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
NUDT3-201ENST00000607016 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
NUDT3-201ENST00000607016 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
NUDT3-201ENST00000607016 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
NUDT3-201ENST00000607016 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
NUDT3-201ENST00000607016 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
NUDT3-201ENST00000607016 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
NUDT3-201ENST00000607016 MT4P47944 62 aa4.07□□□□□ -1.76
NUDT3-201ENST00000607016 MT1EP04732 61 aa4.06□□□□□ -1.76
NUDT3-201ENST00000607016 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
NUDT3-201ENST00000607016 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
NUDT3-201ENST00000607016 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
NUDT3-201ENST00000607016 MT3P25713 68 aa3.99□□□□□ -1.77
NUDT3-201ENST00000607016 HSPG2P98160 4391 aa3.99□□□□□ -1.77
NUDT3-201ENST00000607016 MT1MQ8N339 61 aa3.97□□□□□ -1.77
NUDT3-201ENST00000607016 KRTAP17-1Q9BYP8 105 aa3.97□□□□□ -1.77
NUDT3-201ENST00000607016 TNXBP22105 4242 aa3.93□□□□□ -1.78
NUDT3-201ENST00000607016 LPAP08519 4548 aa3.9□□□□□ -1.78
NUDT3-201ENST00000607016 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
NUDT3-201ENST00000607016 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
NUDT3-201ENST00000607016 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
NUDT3-201ENST00000607016 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.8
NUDT3-201ENST00000607016 RYR1P21817 5038 aa3.8□□□□□ -1.8
NUDT3-201ENST00000607016 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
NUDT3-201ENST00000607016 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
NUDT3-201ENST00000607016 LRP2P98164 4655 aa3.75□□□□□ -1.81
NUDT3-201ENST00000607016 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
NUDT3-201ENST00000607016 RYR3Q15413 4870 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms