RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
TUBE1-211ENST00000605457 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
TUBE1-211ENST00000605457 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
TUBE1-211ENST00000605457 IMUPQ9GZP8 106 aa6.72□□□□□ -1.33
TUBE1-211ENST00000605457 S4R3F8 94 aa6.72□□□□□ -1.33
TUBE1-211ENST00000605457 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
TUBE1-211ENST00000605457 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
TUBE1-211ENST00000605457 MP68P56378 58 aa6.7□□□□□ -1.34
TUBE1-211ENST00000605457 LCA10Q71F78 164 aa6.7□□□□□ -1.34
TUBE1-211ENST00000605457 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
TUBE1-211ENST00000605457 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
TUBE1-211ENST00000605457 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
TUBE1-211ENST00000605457 H3BPC8 53 aa6.65□□□□□ -1.35
TUBE1-211ENST00000605457 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
TUBE1-211ENST00000605457 USH2AO75445 5202 aa6.62□□□□□ -1.35
TUBE1-211ENST00000605457 FAM236AA0A1B0GUQ0 79 aa6.61□□□□□ -1.35
TUBE1-211ENST00000605457 FAM236BA0A1B0GV22 79 aa6.61□□□□□ -1.35
TUBE1-211ENST00000605457 A8MUN3 132 aa6.6□□□□□ -1.35
TUBE1-211ENST00000605457 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
TUBE1-211ENST00000605457 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
TUBE1-211ENST00000605457 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
TUBE1-211ENST00000605457 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
TUBE1-211ENST00000605457 NDUFC1O43677 76 aa6.51□□□□□ -1.37
TUBE1-211ENST00000605457 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
TUBE1-211ENST00000605457 H0YAA0 97 aa6.43□□□□□ -1.38
TUBE1-211ENST00000605457 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
TUBE1-211ENST00000605457 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
TUBE1-211ENST00000605457 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
TUBE1-211ENST00000605457 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
TUBE1-211ENST00000605457 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
TUBE1-211ENST00000605457 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
TUBE1-211ENST00000605457 C20orf197Q8N268 126 aa6.36□□□□□ -1.39
TUBE1-211ENST00000605457 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
TUBE1-211ENST00000605457 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
TUBE1-211ENST00000605457 ACYP2P14621 99 aa6.35□□□□□ -1.39
TUBE1-211ENST00000605457 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
TUBE1-211ENST00000605457 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
TUBE1-211ENST00000605457 MT1BP07438 61 aa6.32□□□□□ -1.4
TUBE1-211ENST00000605457 Q5VV11 94 aa6.31□□□□□ -1.4
TUBE1-211ENST00000605457 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
TUBE1-211ENST00000605457 COX7CP15954 63 aa6.26□□□□□ -1.41
TUBE1-211ENST00000605457 P0C880 135 aa6.25□□□□□ -1.41
TUBE1-211ENST00000605457 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
TUBE1-211ENST00000605457 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
TUBE1-211ENST00000605457 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.41
TUBE1-211ENST00000605457 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
TUBE1-211ENST00000605457 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
TUBE1-211ENST00000605457 R4GN34 69 aa6.17□□□□□ -1.42
TUBE1-211ENST00000605457 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
TUBE1-211ENST00000605457 A6NN06 94 aa6.15□□□□□ -1.42
TUBE1-211ENST00000605457 H7BZZ5 65 aa6.14□□□□□ -1.43
TUBE1-211ENST00000605457 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
TUBE1-211ENST00000605457 M0QZ58 72 aa6.14□□□□□ -1.43
TUBE1-211ENST00000605457 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
TUBE1-211ENST00000605457 COA5Q86WW8 74 aa6.11□□□□□ -1.43
TUBE1-211ENST00000605457 H3BS24 57 aa6.04□□□□□ -1.44
TUBE1-211ENST00000605457 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
TUBE1-211ENST00000605457 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
TUBE1-211ENST00000605457 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
TUBE1-211ENST00000605457 CCDC179H3BU77 68 aa6.02□□□□□ -1.45
TUBE1-211ENST00000605457 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
TUBE1-211ENST00000605457 MT1XP80297 61 aa5.98□□□□□ -1.45
TUBE1-211ENST00000605457 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
TUBE1-211ENST00000605457 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
TUBE1-211ENST00000605457 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
TUBE1-211ENST00000605457 SEC61GP60059 68 aa5.9□□□□□ -1.46
TUBE1-211ENST00000605457 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
TUBE1-211ENST00000605457 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
TUBE1-211ENST00000605457 TMEM258P61165 79 aa5.81□□□□□ -1.48
TUBE1-211ENST00000605457 A0A1B0GU33 70 aa5.79□□□□□ -1.48
TUBE1-211ENST00000605457 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
TUBE1-211ENST00000605457 A0A1B0GU69 56 aa5.78□□□□□ -1.48
TUBE1-211ENST00000605457 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.48
TUBE1-211ENST00000605457 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
TUBE1-211ENST00000605457 KMT2DO14686 5537 aa5.76□□□□□ -1.49
TUBE1-211ENST00000605457 A0A0D9SG42 100 aa5.74□□□□□ -1.49
TUBE1-211ENST00000605457 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
TUBE1-211ENST00000605457 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
TUBE1-211ENST00000605457 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
TUBE1-211ENST00000605457 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
TUBE1-211ENST00000605457 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
TUBE1-211ENST00000605457 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
TUBE1-211ENST00000605457 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
TUBE1-211ENST00000605457 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
TUBE1-211ENST00000605457 NEBP20929 6669 aa5.63□□□□□ -1.51
TUBE1-211ENST00000605457 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
TUBE1-211ENST00000605457 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
TUBE1-211ENST00000605457 PCP4P48539 62 aa5.62□□□□□ -1.51
TUBE1-211ENST00000605457 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
TUBE1-211ENST00000605457 A8MU10 97 aa5.6□□□□□ -1.51
TUBE1-211ENST00000605457 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
TUBE1-211ENST00000605457 UQCR11O14957 56 aa5.48□□□□□ -1.53
TUBE1-211ENST00000605457 SPRR2EP22531 72 aa5.48□□□□□ -1.53
TUBE1-211ENST00000605457 SPRR2BP35325 72 aa5.48□□□□□ -1.53
TUBE1-211ENST00000605457 SPRR2AP35326 72 aa5.48□□□□□ -1.53
TUBE1-211ENST00000605457 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
TUBE1-211ENST00000605457 V9GYY9 64 aa5.44□□□□□ -1.54
TUBE1-211ENST00000605457 Q1T7F1 81 aa5.43□□□□□ -1.54
TUBE1-211ENST00000605457 PSPHP1O15172 72 aa5.39□□□□□ -1.55
TUBE1-211ENST00000605457 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms