RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SPINK7P58062 85 aa5.22□□□□□ -1.57
UPF1-213ENST00000601981 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.58
UPF1-213ENST00000601981 COA5Q86WW8 74 aa5.2□□□□□ -1.58
UPF1-213ENST00000601981 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
UPF1-213ENST00000601981 ACYP2P14621 99 aa5.19□□□□□ -1.58
UPF1-213ENST00000601981 A8MUN3 132 aa5.18□□□□□ -1.58
UPF1-213ENST00000601981 RBM12B-AS1Q9P1G2 102 aa5.18□□□□□ -1.58
UPF1-213ENST00000601981 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
UPF1-213ENST00000601981 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
UPF1-213ENST00000601981 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
UPF1-213ENST00000601981 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
UPF1-213ENST00000601981 MPLKIPQ8TAP9 179 aa5.09□□□□□ -1.59
UPF1-213ENST00000601981 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
UPF1-213ENST00000601981 Q1T7F1 81 aa5.08□□□□□ -1.6
UPF1-213ENST00000601981 V9GYY9 64 aa5.08□□□□□ -1.6
UPF1-213ENST00000601981 M0R2T5 61 aa5.07□□□□□ -1.6
UPF1-213ENST00000601981 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
UPF1-213ENST00000601981 MT1HP80294 61 aa5.05□□□□□ -1.6
UPF1-213ENST00000601981 SPTSSBQ8NFR3 76 aa5.02□□□□□ -1.61
UPF1-213ENST00000601981 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
UPF1-213ENST00000601981 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
UPF1-213ENST00000601981 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
UPF1-213ENST00000601981 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
UPF1-213ENST00000601981 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
UPF1-213ENST00000601981 S4R3F8 94 aa4.96□□□□□ -1.62
UPF1-213ENST00000601981 PSPHP1O15172 72 aa4.94□□□□□ -1.62
UPF1-213ENST00000601981 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
UPF1-213ENST00000601981 Q5VV11 94 aa4.93□□□□□ -1.62
UPF1-213ENST00000601981 LCA10Q71F78 164 aa4.93□□□□□ -1.62
UPF1-213ENST00000601981 A0A1B0GU69 56 aa4.9□□□□□ -1.63
UPF1-213ENST00000601981 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
UPF1-213ENST00000601981 SEC61GP60059 68 aa4.87□□□□□ -1.63
UPF1-213ENST00000601981 CSAG1Q6PB30 78 aa4.83□□□□□ -1.64
UPF1-213ENST00000601981 A6NED7 52 aa4.81□□□□□ -1.64
UPF1-213ENST00000601981 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
UPF1-213ENST00000601981 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
UPF1-213ENST00000601981 UQCR11O14957 56 aa4.77□□□□□ -1.65
UPF1-213ENST00000601981 MT2AP02795 61 aa4.77□□□□□ -1.65
UPF1-213ENST00000601981 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
UPF1-213ENST00000601981 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
UPF1-213ENST00000601981 H0YAA0 97 aa4.76□□□□□ -1.65
UPF1-213ENST00000601981 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
UPF1-213ENST00000601981 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
UPF1-213ENST00000601981 A0A1B0GU33 70 aa4.74□□□□□ -1.65
UPF1-213ENST00000601981 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
UPF1-213ENST00000601981 MT1FP04733 61 aa4.73□□□□□ -1.65
UPF1-213ENST00000601981 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
UPF1-213ENST00000601981 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
UPF1-213ENST00000601981 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
UPF1-213ENST00000601981 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
UPF1-213ENST00000601981 P0C880 135 aa4.7□□□□□ -1.66
UPF1-213ENST00000601981 A8MU10 97 aa4.68□□□□□ -1.66
UPF1-213ENST00000601981 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
UPF1-213ENST00000601981 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
UPF1-213ENST00000601981 USH2AO75445 5202 aa4.65□□□□□ -1.66
UPF1-213ENST00000601981 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
UPF1-213ENST00000601981 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
UPF1-213ENST00000601981 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
UPF1-213ENST00000601981 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
UPF1-213ENST00000601981 M0QZ58 72 aa4.62□□□□□ -1.67
UPF1-213ENST00000601981 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
UPF1-213ENST00000601981 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
UPF1-213ENST00000601981 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
UPF1-213ENST00000601981 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
UPF1-213ENST00000601981 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
UPF1-213ENST00000601981 R4GN34 69 aa4.56□□□□□ -1.68
UPF1-213ENST00000601981 A0A0D9SG42 100 aa4.53□□□□□ -1.68
UPF1-213ENST00000601981 A6NN06 94 aa4.52□□□□□ -1.69
UPF1-213ENST00000601981 K7ERS5 55 aa4.52□□□□□ -1.69
UPF1-213ENST00000601981 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
UPF1-213ENST00000601981 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
UPF1-213ENST00000601981 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
UPF1-213ENST00000601981 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
UPF1-213ENST00000601981 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
UPF1-213ENST00000601981 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
UPF1-213ENST00000601981 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
UPF1-213ENST00000601981 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
UPF1-213ENST00000601981 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
UPF1-213ENST00000601981 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
UPF1-213ENST00000601981 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
UPF1-213ENST00000601981 MT1BP07438 61 aa4.39□□□□□ -1.71
UPF1-213ENST00000601981 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
UPF1-213ENST00000601981 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
UPF1-213ENST00000601981 NEBP20929 6669 aa4.35□□□□□ -1.71
UPF1-213ENST00000601981 ROMO1P60602 79 aa4.33□□□□□ -1.72
UPF1-213ENST00000601981 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
UPF1-213ENST00000601981 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
UPF1-213ENST00000601981 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
UPF1-213ENST00000601981 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
UPF1-213ENST00000601981 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
UPF1-213ENST00000601981 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
UPF1-213ENST00000601981 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
UPF1-213ENST00000601981 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
UPF1-213ENST00000601981 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
UPF1-213ENST00000601981 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
UPF1-213ENST00000601981 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
UPF1-213ENST00000601981 MT1XP80297 61 aa4.18□□□□□ -1.74
UPF1-213ENST00000601981 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
UPF1-213ENST00000601981 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
UPF1-213ENST00000601981 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms