RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
RPS28-203ENST00000600659 KLKP1Q107X0 134 aa7.22□□□□□ -1.25
RPS28-203ENST00000600659 H3BPC8 53 aa7.2□□□□□ -1.26
RPS28-203ENST00000600659 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
RPS28-203ENST00000600659 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
RPS28-203ENST00000600659 SMIM20Q8N5G0 67 aa7.16□□□□□ -1.26
RPS28-203ENST00000600659 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
RPS28-203ENST00000600659 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
RPS28-203ENST00000600659 A8MUN3 132 aa7.12□□□□□ -1.27
RPS28-203ENST00000600659 TRAV7A0A075B6U4 112 aa7.11□□□□□ -1.27
RPS28-203ENST00000600659 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
RPS28-203ENST00000600659 MT1BP07438 61 aa7.07□□□□□ -1.28
RPS28-203ENST00000600659 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
RPS28-203ENST00000600659 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
RPS28-203ENST00000600659 NDUFC1O43677 76 aa7.04□□□□□ -1.28
RPS28-203ENST00000600659 H0YAA0 97 aa7.02□□□□□ -1.28
RPS28-203ENST00000600659 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
RPS28-203ENST00000600659 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
RPS28-203ENST00000600659 Q5VV11 94 aa6.97□□□□□ -1.29
RPS28-203ENST00000600659 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
RPS28-203ENST00000600659 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
RPS28-203ENST00000600659 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
RPS28-203ENST00000600659 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
RPS28-203ENST00000600659 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
RPS28-203ENST00000600659 ACYP2P14621 99 aa6.9□□□□□ -1.3
RPS28-203ENST00000600659 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
RPS28-203ENST00000600659 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
RPS28-203ENST00000600659 A6NN06 94 aa6.83□□□□□ -1.32
RPS28-203ENST00000600659 P0C880 135 aa6.83□□□□□ -1.32
RPS28-203ENST00000600659 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
RPS28-203ENST00000600659 COX7CP15954 63 aa6.8□□□□□ -1.32
RPS28-203ENST00000600659 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
RPS28-203ENST00000600659 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.32
RPS28-203ENST00000600659 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
RPS28-203ENST00000600659 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.34
RPS28-203ENST00000600659 R4GN34 69 aa6.7□□□□□ -1.34
RPS28-203ENST00000600659 M0QZ58 72 aa6.67□□□□□ -1.34
RPS28-203ENST00000600659 MT1XP80297 61 aa6.65□□□□□ -1.35
RPS28-203ENST00000600659 H7BZZ5 65 aa6.63□□□□□ -1.35
RPS28-203ENST00000600659 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
RPS28-203ENST00000600659 COA5Q86WW8 74 aa6.6□□□□□ -1.35
RPS28-203ENST00000600659 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
RPS28-203ENST00000600659 KMT2DO14686 5537 aa6.59□□□□□ -1.35
RPS28-203ENST00000600659 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
RPS28-203ENST00000600659 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
RPS28-203ENST00000600659 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
RPS28-203ENST00000600659 KRTAP5-9P26371 169 aa6.51□□□□□ -1.37
RPS28-203ENST00000600659 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
RPS28-203ENST00000600659 NEBP20929 6669 aa6.5□□□□□ -1.37
RPS28-203ENST00000600659 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
RPS28-203ENST00000600659 SEC61GP60059 68 aa6.47□□□□□ -1.37
RPS28-203ENST00000600659 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
RPS28-203ENST00000600659 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
RPS28-203ENST00000600659 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
RPS28-203ENST00000600659 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
RPS28-203ENST00000600659 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
RPS28-203ENST00000600659 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
RPS28-203ENST00000600659 TMEM258P61165 79 aa6.32□□□□□ -1.4
RPS28-203ENST00000600659 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
RPS28-203ENST00000600659 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
RPS28-203ENST00000600659 A0A1B0GU33 70 aa6.29□□□□□ -1.4
RPS28-203ENST00000600659 A0A1B0GU69 56 aa6.28□□□□□ -1.4
RPS28-203ENST00000600659 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
RPS28-203ENST00000600659 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
RPS28-203ENST00000600659 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
RPS28-203ENST00000600659 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
RPS28-203ENST00000600659 A0A0D9SG42 100 aa6.19□□□□□ -1.42
RPS28-203ENST00000600659 SPRR2EP22531 72 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 SPRR2BP35325 72 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 SPRR2AP35326 72 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
RPS28-203ENST00000600659 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.43
RPS28-203ENST00000600659 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.43
RPS28-203ENST00000600659 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
RPS28-203ENST00000600659 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
RPS28-203ENST00000600659 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
RPS28-203ENST00000600659 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
RPS28-203ENST00000600659 A8MU10 97 aa6.04□□□□□ -1.44
RPS28-203ENST00000600659 KRTAP2-3P0C7H8 128 aa6□□□□□ -1.45
RPS28-203ENST00000600659 KRTAP2-4Q9BYR9 128 aa6□□□□□ -1.45
RPS28-203ENST00000600659 UQCR11O14957 56 aa5.99□□□□□ -1.45
RPS28-203ENST00000600659 PCP4P48539 62 aa5.99□□□□□ -1.45
RPS28-203ENST00000600659 V9GYY9 64 aa5.99□□□□□ -1.45
RPS28-203ENST00000600659 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
RPS28-203ENST00000600659 SPRR2DP22532 72 aa5.94□□□□□ -1.46
RPS28-203ENST00000600659 Q1T7F1 81 aa5.92□□□□□ -1.46
RPS28-203ENST00000600659 MT1EP04732 61 aa5.89□□□□□ -1.47
RPS28-203ENST00000600659 PSPHP1O15172 72 aa5.87□□□□□ -1.47
RPS28-203ENST00000600659 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
RPS28-203ENST00000600659 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
RPS28-203ENST00000600659 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
RPS28-203ENST00000600659 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
RPS28-203ENST00000600659 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
RPS28-203ENST00000600659 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
RPS28-203ENST00000600659 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
RPS28-203ENST00000600659 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RPS28-203ENST00000600659 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
RPS28-203ENST00000600659 K7ERS5 55 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms