RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 LCA10Q71F78 164 aa11.52□□□□□ -0.57
SYMPK-212ENST00000598896 S4R3F8 94 aa11.51□□□□□ -0.57
SYMPK-212ENST00000598896 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
SYMPK-212ENST00000598896 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
SYMPK-212ENST00000598896 FAT4Q6V0I7 4981 aa11.41□□□□□ -0.58
SYMPK-212ENST00000598896 SMIM26A0A096LP01 95 aa11.4□□□□□ -0.58
SYMPK-212ENST00000598896 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
SYMPK-212ENST00000598896 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
SYMPK-212ENST00000598896 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
SYMPK-212ENST00000598896 Q1T7F1 81 aa11.24□□□□□ -0.61
SYMPK-212ENST00000598896 MT1HP80294 61 aa11.21□□□□□ -0.61
SYMPK-212ENST00000598896 LINC01558Q9Y6Z2 57 aa11.21□□□□□ -0.62
SYMPK-212ENST00000598896 V9GYY9 64 aa11.15□□□□□ -0.62
SYMPK-212ENST00000598896 PSPHP1O15172 72 aa11.09□□□□□ -0.63
SYMPK-212ENST00000598896 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
SYMPK-212ENST00000598896 A0A1B0GU69 56 aa11.08□□□□□ -0.64
SYMPK-212ENST00000598896 M0R2T5 61 aa11.04□□□□□ -0.64
SYMPK-212ENST00000598896 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
SYMPK-212ENST00000598896 SEC61GP60059 68 aa11.01□□□□□ -0.65
SYMPK-212ENST00000598896 KRTAP10-6P60371 365 aaPredicted RBP11□□□□□ -0.65
SYMPK-212ENST00000598896 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
SYMPK-212ENST00000598896 H0YAA0 97 aa10.99□□□□□ -0.65
SYMPK-212ENST00000598896 Q5VV11 94 aa10.99□□□□□ -0.65
SYMPK-212ENST00000598896 P0C880 135 aa10.95□□□□□ -0.66
SYMPK-212ENST00000598896 LCE2AQ5TA79 106 aaPredicted RBP10.89□□□□□ -0.67
SYMPK-212ENST00000598896 A0A1B0GU33 70 aa10.8□□□□□ -0.68
SYMPK-212ENST00000598896 KRTAP9-8Q9BYQ0 159 aa10.79□□□□□ -0.68
SYMPK-212ENST00000598896 LORP23490 312 aaPredicted RBP10.77□□□□□ -0.69
SYMPK-212ENST00000598896 MT2AP02795 61 aa10.73□□□□□ -0.69
SYMPK-212ENST00000598896 A6NED7 52 aa10.71□□□□□ -0.69
SYMPK-212ENST00000598896 UQCR11O14957 56 aa10.7□□□□□ -0.7
SYMPK-212ENST00000598896 KRTAP13-4Q3LI77 160 aa10.7□□□□□ -0.7
SYMPK-212ENST00000598896 MT1FP04733 61 aa10.68□□□□□ -0.7
SYMPK-212ENST00000598896 SPATA8Q6RVD6 105 aa10.68□□□□□ -0.7
SYMPK-212ENST00000598896 KRTAP10-10P60014 251 aa10.61□□□□□ -0.71
SYMPK-212ENST00000598896 R4GN34 69 aa10.6□□□□□ -0.71
SYMPK-212ENST00000598896 M0QZ58 72 aa10.59□□□□□ -0.71
SYMPK-212ENST00000598896 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
SYMPK-212ENST00000598896 A8MU10 97 aa10.56□□□□□ -0.72
SYMPK-212ENST00000598896 CRIPTQ9P021 101 aa10.53□□□□□ -0.72
SYMPK-212ENST00000598896 BRK1Q8WUW1 75 aa10.5□□□□□ -0.73
SYMPK-212ENST00000598896 CDC42SE1Q9NRR8 79 aa10.5□□□□□ -0.73
SYMPK-212ENST00000598896 A0A0D9SG42 100 aa10.45□□□□□ -0.74
SYMPK-212ENST00000598896 KRTAP19-1Q8IUB9 90 aa10.44□□□□□ -0.74
SYMPK-212ENST00000598896 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
SYMPK-212ENST00000598896 SPRR2GQ9BYE4 73 aa10.42□□□□□ -0.74
SYMPK-212ENST00000598896 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
SYMPK-212ENST00000598896 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
SYMPK-212ENST00000598896 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
SYMPK-212ENST00000598896 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
SYMPK-212ENST00000598896 A6NN06 94 aa10.18□□□□□ -0.78
SYMPK-212ENST00000598896 KRTAP19-8Q3LI54 63 aa10.17□□□□□ -0.78
SYMPK-212ENST00000598896 PRO0628Q9UI54 55 aa10.16□□□□□ -0.78
SYMPK-212ENST00000598896 LCE2BO14633 110 aa10.15□□□□□ -0.78
SYMPK-212ENST00000598896 MT1BP07438 61 aa10.08□□□□□ -0.8
SYMPK-212ENST00000598896 K7ERS5 55 aa10.06□□□□□ -0.8
SYMPK-212ENST00000598896 PLAC4Q8WY50 150 aa9.98□□□□□ -0.81
SYMPK-212ENST00000598896 USH2AO75445 5202 aa9.96□□□□□ -0.81
SYMPK-212ENST00000598896 PMAIP1Q13794 54 aa9.9□□□□□ -0.82
SYMPK-212ENST00000598896 CAMK2N1Q7Z7J9 78 aa9.89□□□□□ -0.83
SYMPK-212ENST00000598896 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
SYMPK-212ENST00000598896 MT1XP80297 61 aa9.72□□□□□ -0.85
SYMPK-212ENST00000598896 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
SYMPK-212ENST00000598896 FSIP2Q5CZC0 6907 aa9.71□□□□□ -0.85
SYMPK-212ENST00000598896 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
SYMPK-212ENST00000598896 ROMO1P60602 79 aa9.68□□□□□ -0.86
SYMPK-212ENST00000598896 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
SYMPK-212ENST00000598896 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
SYMPK-212ENST00000598896 PRO2289Q9P1D8 64 aa9.54□□□□□ -0.88
SYMPK-212ENST00000598896 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
SYMPK-212ENST00000598896 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
SYMPK-212ENST00000598896 TNP1P09430 55 aa9.38□□□□□ -0.91
SYMPK-212ENST00000598896 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
SYMPK-212ENST00000598896 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
SYMPK-212ENST00000598896 KRTAP10-7P60409 375 aaPredicted RBP9.34□□□□□ -0.91
SYMPK-212ENST00000598896 FCGBPQ9Y6R7 5405 aaPredicted RBP9.27□□□□□ -0.92
SYMPK-212ENST00000598896 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
SYMPK-212ENST00000598896 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
SYMPK-212ENST00000598896 KMT2DO14686 5537 aa9.11□□□□□ -0.95
SYMPK-212ENST00000598896 LCE3AQ5TA76 89 aa9.08□□□□□ -0.96
SYMPK-212ENST00000598896 KRTAP4-8A0A0G2JLE6 195 aa9.03□□□□□ -0.96
SYMPK-212ENST00000598896 KRTAP4-8Q9BYQ9 185 aa9.03□□□□□ -0.96
SYMPK-212ENST00000598896 KRTAP23-1A1A580 65 aa9.02□□□□□ -0.97
SYMPK-212ENST00000598896 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
SYMPK-212ENST00000598896 SVIPQ8NHG7 77 aa8.92□□□□□ -0.98
SYMPK-212ENST00000598896 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
SYMPK-212ENST00000598896 KRTAP8-1Q8IUC2 63 aa8.86□□□□□ -0.99
SYMPK-212ENST00000598896 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
SYMPK-212ENST00000598896 KRTAP19-5Q3LI72 72 aa8.74□□□□□ -1.01
SYMPK-212ENST00000598896 KRTAP12-3P60328 96 aa8.7□□□□□ -1.02
SYMPK-212ENST00000598896 KRTAP19-7Q3SYF9 63 aa8.68□□□□□ -1.02
SYMPK-212ENST00000598896 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
SYMPK-212ENST00000598896 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
SYMPK-212ENST00000598896 MT1EP04732 61 aa8.52□□□□□ -1.05
SYMPK-212ENST00000598896 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
SYMPK-212ENST00000598896 SPRR2FQ96RM1 72 aa8.46□□□□□ -1.06
SYMPK-212ENST00000598896 MUC12Q9UKN1 5478 aa8.44□□□□□ -1.06
SYMPK-212ENST00000598896 KRTAP5-9P26371 169 aa8.41□□□□□ -1.06
SYMPK-212ENST00000598896 MT1LQ93083 61 aa8.32□□□□□ -1.08
SYMPK-212ENST00000598896 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms