RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CSAG1Q6PB30 78 aa9.76□□□□□ -0.85
PNKP-209ENST00000596726 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
PNKP-209ENST00000596726 TRAV7A0A075B6U4 112 aa9.74□□□□□ -0.85
PNKP-209ENST00000596726 COX7CP15954 63 aa9.72□□□□□ -0.85
PNKP-209ENST00000596726 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
PNKP-209ENST00000596726 OCR1Q9BZK8 76 aa9.72□□□□□ -0.85
PNKP-209ENST00000596726 FCGBPQ9Y6R7 5405 aaPredicted RBP9.69□□□□□ -0.86
PNKP-209ENST00000596726 KRTAP19-6Q3LI70 58 aa9.65□□□□□ -0.86
PNKP-209ENST00000596726 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
PNKP-209ENST00000596726 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
PNKP-209ENST00000596726 MP68P56378 58 aa9.61□□□□□ -0.87
PNKP-209ENST00000596726 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
PNKP-209ENST00000596726 CCDC179H3BU77 68 aa9.58□□□□□ -0.88
PNKP-209ENST00000596726 A8MUN3 132 aa9.56□□□□□ -0.88
PNKP-209ENST00000596726 H3BPC8 53 aa9.53□□□□□ -0.88
PNKP-209ENST00000596726 SPRR2GQ9BYE4 73 aa9.52□□□□□ -0.89
PNKP-209ENST00000596726 NDUFC1O43677 76 aa9.5□□□□□ -0.89
PNKP-209ENST00000596726 C20orf197Q8N268 126 aa9.5□□□□□ -0.89
PNKP-209ENST00000596726 KRTAP9-7A8MTY7 169 aa9.45□□□□□ -0.9
PNKP-209ENST00000596726 KRTAP19-8Q3LI54 63 aa9.45□□□□□ -0.9
PNKP-209ENST00000596726 MT1BP07438 61 aa9.43□□□□□ -0.9
PNKP-209ENST00000596726 H0YAA0 97 aa9.42□□□□□ -0.9
PNKP-209ENST00000596726 Q5VV11 94 aa9.39□□□□□ -0.91
PNKP-209ENST00000596726 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
PNKP-209ENST00000596726 TMEM258P61165 79 aa9.38□□□□□ -0.91
PNKP-209ENST00000596726 SNURFQ9Y675 71 aa9.37□□□□□ -0.91
PNKP-209ENST00000596726 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
PNKP-209ENST00000596726 H7BZZ5 65 aa9.32□□□□□ -0.92
PNKP-209ENST00000596726 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
PNKP-209ENST00000596726 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
PNKP-209ENST00000596726 CYSTM1Q9H1C7 97 aa9.29□□□□□ -0.92
PNKP-209ENST00000596726 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
PNKP-209ENST00000596726 A6NN06 94 aa9.21□□□□□ -0.94
PNKP-209ENST00000596726 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
PNKP-209ENST00000596726 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
PNKP-209ENST00000596726 ACYP2P14621 99 aa9.13□□□□□ -0.95
PNKP-209ENST00000596726 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
PNKP-209ENST00000596726 P0C880 135 aa9.12□□□□□ -0.95
PNKP-209ENST00000596726 SYNE2Q8WXH0 6885 aaKnown RBP9.12□□□□□ -0.95
PNKP-209ENST00000596726 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
PNKP-209ENST00000596726 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
PNKP-209ENST00000596726 KRTAP6-3Q3LI67 103 aa9.06□□□□□ -0.96
PNKP-209ENST00000596726 R4GN34 69 aa9.03□□□□□ -0.96
PNKP-209ENST00000596726 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
PNKP-209ENST00000596726 M0QZ58 72 aa8.96□□□□□ -0.98
PNKP-209ENST00000596726 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
PNKP-209ENST00000596726 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
PNKP-209ENST00000596726 MT1XP80297 61 aa8.87□□□□□ -0.99
PNKP-209ENST00000596726 SMIM26A0A096LP01 95 aa8.86□□□□□ -0.99
PNKP-209ENST00000596726 PRO2289Q9P1D8 64 aa8.84□□□□□ -0.99
PNKP-209ENST00000596726 COA5Q86WW8 74 aa8.83□□□□□ -1
PNKP-209ENST00000596726 LINC01554Q52M75 96 aa8.8□□□□□ -1
PNKP-209ENST00000596726 V9GYY9 64 aa8.74□□□□□ -1.01
PNKP-209ENST00000596726 KRTAP5-9P26371 169 aa8.72□□□□□ -1.01
PNKP-209ENST00000596726 Q1T7F1 81 aa8.66□□□□□ -1.02
PNKP-209ENST00000596726 MUC12Q9UKN1 5478 aa8.66□□□□□ -1.02
PNKP-209ENST00000596726 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
PNKP-209ENST00000596726 KMT2DO14686 5537 aa8.6□□□□□ -1.03
PNKP-209ENST00000596726 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
PNKP-209ENST00000596726 NEBP20929 6669 aa8.57□□□□□ -1.04
PNKP-209ENST00000596726 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
PNKP-209ENST00000596726 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
PNKP-209ENST00000596726 SEC61GP60059 68 aa8.47□□□□□ -1.05
PNKP-209ENST00000596726 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
PNKP-209ENST00000596726 KRTAP10-7P60409 375 aaPredicted RBP8.46□□□□□ -1.06
PNKP-209ENST00000596726 SPRR2FQ96RM1 72 aa8.45□□□□□ -1.06
PNKP-209ENST00000596726 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
PNKP-209ENST00000596726 KRTAP4-8A0A0G2JLE6 195 aa8.43□□□□□ -1.06
PNKP-209ENST00000596726 KRTAP10-12P60413 245 aa8.43□□□□□ -1.06
PNKP-209ENST00000596726 KRTAP4-8Q9BYQ9 185 aa8.43□□□□□ -1.06
PNKP-209ENST00000596726 A0A1B0GU69 56 aa8.41□□□□□ -1.06
PNKP-209ENST00000596726 PSPHP1O15172 72 aa8.39□□□□□ -1.07
PNKP-209ENST00000596726 A0A1B0GU33 70 aa8.34□□□□□ -1.07
PNKP-209ENST00000596726 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
PNKP-209ENST00000596726 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
PNKP-209ENST00000596726 SPRR2EP22531 72 aa8.29□□□□□ -1.08
PNKP-209ENST00000596726 SPRR2BP35325 72 aa8.29□□□□□ -1.08
PNKP-209ENST00000596726 SPRR2AP35326 72 aa8.29□□□□□ -1.08
PNKP-209ENST00000596726 KRTAP20-1Q3LI63 56 aa8.29□□□□□ -1.08
PNKP-209ENST00000596726 A0A0D9SG42 100 aa8.28□□□□□ -1.08
PNKP-209ENST00000596726 LCE1AQ5T7P2 110 aa8.24□□□□□ -1.09
PNKP-209ENST00000596726 A6NED7 52 aa8.21□□□□□ -1.1
PNKP-209ENST00000596726 UQCR11O14957 56 aa8.2□□□□□ -1.1
PNKP-209ENST00000596726 KRTAP12-1P59990 96 aa8.17□□□□□ -1.1
PNKP-209ENST00000596726 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
PNKP-209ENST00000596726 KRTAP2-3P0C7H8 128 aa8.13□□□□□ -1.11
PNKP-209ENST00000596726 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
PNKP-209ENST00000596726 KRTAP2-4Q9BYR9 128 aa8.13□□□□□ -1.11
PNKP-209ENST00000596726 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
PNKP-209ENST00000596726 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
PNKP-209ENST00000596726 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
PNKP-209ENST00000596726 A8MU10 97 aa8.04□□□□□ -1.12
PNKP-209ENST00000596726 SPRR2DP22532 72 aa8.01□□□□□ -1.13
PNKP-209ENST00000596726 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
PNKP-209ENST00000596726 KRTAP2-2Q9BYT5 123 aa7.89□□□□□ -1.15
PNKP-209ENST00000596726 KRTAP2-1Q9BYU5 128 aa7.89□□□□□ -1.15
PNKP-209ENST00000596726 MT1EP04732 61 aa7.85□□□□□ -1.15
PNKP-209ENST00000596726 K7ERS5 55 aa7.82□□□□□ -1.16
PNKP-209ENST00000596726 C10orf95Q9H7T3 257 aa7.81□□□□□ -1.16
PNKP-209ENST00000596726 LCE3BQ5TA77 95 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms