RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MT1FP04733 61 aa7.11□□□□□ -1.27
DDX39A-221ENST00000593026 LCA10Q71F78 164 aa7.11□□□□□ -1.27
DDX39A-221ENST00000593026 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
DDX39A-221ENST00000593026 A8MUN3 132 aa7.09□□□□□ -1.27
DDX39A-221ENST00000593026 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
DDX39A-221ENST00000593026 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
DDX39A-221ENST00000593026 SERP2Q8N6R1 65 aa7.04□□□□□ -1.28
DDX39A-221ENST00000593026 COX7CP15954 63 aa7.03□□□□□ -1.28
DDX39A-221ENST00000593026 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
DDX39A-221ENST00000593026 NDUFC1O43677 76 aa6.99□□□□□ -1.29
DDX39A-221ENST00000593026 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
DDX39A-221ENST00000593026 SNURFQ9Y675 71 aa6.99□□□□□ -1.29
DDX39A-221ENST00000593026 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
DDX39A-221ENST00000593026 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
DDX39A-221ENST00000593026 TMEM258P61165 79 aa6.96□□□□□ -1.3
DDX39A-221ENST00000593026 LCE2BO14633 110 aa6.88□□□□□ -1.31
DDX39A-221ENST00000593026 ACYP2P14621 99 aa6.88□□□□□ -1.31
DDX39A-221ENST00000593026 USH2AO75445 5202 aa6.86□□□□□ -1.31
DDX39A-221ENST00000593026 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
DDX39A-221ENST00000593026 H0YAA0 97 aa6.83□□□□□ -1.32
DDX39A-221ENST00000593026 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
DDX39A-221ENST00000593026 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
DDX39A-221ENST00000593026 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
DDX39A-221ENST00000593026 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
DDX39A-221ENST00000593026 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
DDX39A-221ENST00000593026 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
DDX39A-221ENST00000593026 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
DDX39A-221ENST00000593026 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
DDX39A-221ENST00000593026 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
DDX39A-221ENST00000593026 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
DDX39A-221ENST00000593026 H7BZZ5 65 aa6.72□□□□□ -1.33
DDX39A-221ENST00000593026 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
DDX39A-221ENST00000593026 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
DDX39A-221ENST00000593026 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
DDX39A-221ENST00000593026 P0C880 135 aa6.65□□□□□ -1.34
DDX39A-221ENST00000593026 COA5Q86WW8 74 aa6.65□□□□□ -1.34
DDX39A-221ENST00000593026 Q5VV11 94 aa6.64□□□□□ -1.35
DDX39A-221ENST00000593026 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
DDX39A-221ENST00000593026 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
DDX39A-221ENST00000593026 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
DDX39A-221ENST00000593026 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
DDX39A-221ENST00000593026 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
DDX39A-221ENST00000593026 MT1BP07438 61 aa6.59□□□□□ -1.35
DDX39A-221ENST00000593026 R4GN34 69 aa6.59□□□□□ -1.35
DDX39A-221ENST00000593026 M0QZ58 72 aa6.55□□□□□ -1.36
DDX39A-221ENST00000593026 SEC61GP60059 68 aa6.44□□□□□ -1.38
DDX39A-221ENST00000593026 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
DDX39A-221ENST00000593026 A6NN06 94 aa6.43□□□□□ -1.38
DDX39A-221ENST00000593026 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
DDX39A-221ENST00000593026 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
DDX39A-221ENST00000593026 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.39
DDX39A-221ENST00000593026 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
DDX39A-221ENST00000593026 Q1T7F1 81 aa6.38□□□□□ -1.39
DDX39A-221ENST00000593026 V9GYY9 64 aa6.34□□□□□ -1.39
DDX39A-221ENST00000593026 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
DDX39A-221ENST00000593026 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
DDX39A-221ENST00000593026 A0A1B0GU69 56 aa6.31□□□□□ -1.4
DDX39A-221ENST00000593026 A0A1B0GU33 70 aa6.29□□□□□ -1.4
DDX39A-221ENST00000593026 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
DDX39A-221ENST00000593026 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
DDX39A-221ENST00000593026 MT1XP80297 61 aa6.26□□□□□ -1.41
DDX39A-221ENST00000593026 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
DDX39A-221ENST00000593026 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
DDX39A-221ENST00000593026 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
DDX39A-221ENST00000593026 A0A0D9SG42 100 aa6.19□□□□□ -1.42
DDX39A-221ENST00000593026 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
DDX39A-221ENST00000593026 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
DDX39A-221ENST00000593026 PSPHP1O15172 72 aa6.09□□□□□ -1.43
DDX39A-221ENST00000593026 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
DDX39A-221ENST00000593026 A8MU10 97 aa6.05□□□□□ -1.44
DDX39A-221ENST00000593026 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
DDX39A-221ENST00000593026 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
DDX39A-221ENST00000593026 NEBP20929 6669 aa6.02□□□□□ -1.45
DDX39A-221ENST00000593026 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
DDX39A-221ENST00000593026 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
DDX39A-221ENST00000593026 UQCR11O14957 56 aa6.01□□□□□ -1.45
DDX39A-221ENST00000593026 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
DDX39A-221ENST00000593026 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
DDX39A-221ENST00000593026 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
DDX39A-221ENST00000593026 KMT2DO14686 5537 aa5.95□□□□□ -1.46
DDX39A-221ENST00000593026 A6NED7 52 aa5.94□□□□□ -1.46
DDX39A-221ENST00000593026 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
DDX39A-221ENST00000593026 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
DDX39A-221ENST00000593026 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
DDX39A-221ENST00000593026 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
DDX39A-221ENST00000593026 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
DDX39A-221ENST00000593026 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
DDX39A-221ENST00000593026 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
DDX39A-221ENST00000593026 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
DDX39A-221ENST00000593026 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
DDX39A-221ENST00000593026 K7ERS5 55 aa5.75□□□□□ -1.49
DDX39A-221ENST00000593026 SPRR2EP22531 72 aa5.71□□□□□ -1.5
DDX39A-221ENST00000593026 SPRR2BP35325 72 aa5.71□□□□□ -1.5
DDX39A-221ENST00000593026 SPRR2AP35326 72 aa5.71□□□□□ -1.5
DDX39A-221ENST00000593026 TNP1P09430 55 aa5.7□□□□□ -1.5
DDX39A-221ENST00000593026 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
DDX39A-221ENST00000593026 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
DDX39A-221ENST00000593026 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
DDX39A-221ENST00000593026 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
DDX39A-221ENST00000593026 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms