RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 SNURFQ9Y675 71 aa9.77□□□□□ -0.85
DNMT1-227ENST00000592342 NDUFC1O43677 76 aa9.76□□□□□ -0.85
DNMT1-227ENST00000592342 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
DNMT1-227ENST00000592342 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
DNMT1-227ENST00000592342 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
DNMT1-227ENST00000592342 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
DNMT1-227ENST00000592342 COX7CP15954 63 aa9.63□□□□□ -0.87
DNMT1-227ENST00000592342 ACYP2P14621 99 aa9.62□□□□□ -0.87
DNMT1-227ENST00000592342 CRCT1Q9UGL9 99 aa9.62□□□□□ -0.87
DNMT1-227ENST00000592342 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
DNMT1-227ENST00000592342 LCE2BO14633 110 aa9.55□□□□□ -0.88
DNMT1-227ENST00000592342 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
DNMT1-227ENST00000592342 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
DNMT1-227ENST00000592342 H0YAA0 97 aa9.5□□□□□ -0.89
DNMT1-227ENST00000592342 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
DNMT1-227ENST00000592342 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
DNMT1-227ENST00000592342 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
DNMT1-227ENST00000592342 USH2AO75445 5202 aa9.4□□□□□ -0.9
DNMT1-227ENST00000592342 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
DNMT1-227ENST00000592342 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
DNMT1-227ENST00000592342 H7BZZ5 65 aa9.36□□□□□ -0.91
DNMT1-227ENST00000592342 CYSTM1Q9H1C7 97 aa9.36□□□□□ -0.91
DNMT1-227ENST00000592342 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
DNMT1-227ENST00000592342 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
DNMT1-227ENST00000592342 COA5Q86WW8 74 aa9.28□□□□□ -0.92
DNMT1-227ENST00000592342 P0C880 135 aa9.25□□□□□ -0.93
DNMT1-227ENST00000592342 SSPOA2VEC9 5147 aa9.24□□□□□ -0.93
DNMT1-227ENST00000592342 Q5VV11 94 aa9.24□□□□□ -0.93
DNMT1-227ENST00000592342 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
DNMT1-227ENST00000592342 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
DNMT1-227ENST00000592342 R4GN34 69 aa9.2□□□□□ -0.94
DNMT1-227ENST00000592342 KRTAP19-6Q3LI70 58 aa9.16□□□□□ -0.94
DNMT1-227ENST00000592342 M0QZ58 72 aa9.15□□□□□ -0.94
DNMT1-227ENST00000592342 MT1BP07438 61 aa9.15□□□□□ -0.94
DNMT1-227ENST00000592342 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-227ENST00000592342 SEC61GP60059 68 aa9.03□□□□□ -0.96
DNMT1-227ENST00000592342 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
DNMT1-227ENST00000592342 SERP1Q9Y6X1 66 aa9□□□□□ -0.97
DNMT1-227ENST00000592342 TMEM258P61165 79 aa8.99□□□□□ -0.97
DNMT1-227ENST00000592342 FCGBPQ9Y6R7 5405 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-227ENST00000592342 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
DNMT1-227ENST00000592342 A6NN06 94 aa8.96□□□□□ -0.98
DNMT1-227ENST00000592342 KRTAP9-7A8MTY7 169 aa8.96□□□□□ -0.98
DNMT1-227ENST00000592342 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-227ENST00000592342 KRTAP10-5P60370 271 aa8.87□□□□□ -0.99
DNMT1-227ENST00000592342 A0A1B0GU69 56 aa8.84□□□□□ -0.99
DNMT1-227ENST00000592342 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
DNMT1-227ENST00000592342 A0A1B0GU33 70 aa8.78□□□□□ -1
DNMT1-227ENST00000592342 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
DNMT1-227ENST00000592342 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
DNMT1-227ENST00000592342 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
DNMT1-227ENST00000592342 MT1XP80297 61 aa8.68□□□□□ -1.02
DNMT1-227ENST00000592342 PCP4P48539 62 aa8.67□□□□□ -1.02
DNMT1-227ENST00000592342 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
DNMT1-227ENST00000592342 A0A0D9SG42 100 aa8.65□□□□□ -1.02
DNMT1-227ENST00000592342 MACF1Q9UPN3 7388 aaKnown RBP8.62□□□□□ -1.03
DNMT1-227ENST00000592342 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
DNMT1-227ENST00000592342 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
DNMT1-227ENST00000592342 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
DNMT1-227ENST00000592342 SYNE2Q8WXH0 6885 aaKnown RBP8.48□□□□□ -1.05
DNMT1-227ENST00000592342 V9GYY9 64 aa8.46□□□□□ -1.06
DNMT1-227ENST00000592342 A8MU10 97 aa8.44□□□□□ -1.06
DNMT1-227ENST00000592342 KRTAP6-3Q3LI67 103 aa8.44□□□□□ -1.06
DNMT1-227ENST00000592342 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
DNMT1-227ENST00000592342 UQCR11O14957 56 aa8.41□□□□□ -1.06
DNMT1-227ENST00000592342 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
DNMT1-227ENST00000592342 Q1T7F1 81 aa8.37□□□□□ -1.07
DNMT1-227ENST00000592342 PSPHP1O15172 72 aa8.33□□□□□ -1.08
DNMT1-227ENST00000592342 KRTAP10-7P60409 375 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-227ENST00000592342 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
DNMT1-227ENST00000592342 KRTAP10-12P60413 245 aa8.25□□□□□ -1.09
DNMT1-227ENST00000592342 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
DNMT1-227ENST00000592342 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
DNMT1-227ENST00000592342 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
DNMT1-227ENST00000592342 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
DNMT1-227ENST00000592342 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
DNMT1-227ENST00000592342 KMT2DO14686 5537 aa8.15□□□□□ -1.1
DNMT1-227ENST00000592342 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
DNMT1-227ENST00000592342 A6NED7 52 aa8.1□□□□□ -1.11
DNMT1-227ENST00000592342 K7ERS5 55 aa8.07□□□□□ -1.12
DNMT1-227ENST00000592342 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
DNMT1-227ENST00000592342 NEBP20929 6669 aa8.01□□□□□ -1.13
DNMT1-227ENST00000592342 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
DNMT1-227ENST00000592342 TNP1P09430 55 aa7.97□□□□□ -1.13
DNMT1-227ENST00000592342 SPRR2EP22531 72 aa7.91□□□□□ -1.14
DNMT1-227ENST00000592342 SPRR2BP35325 72 aa7.91□□□□□ -1.14
DNMT1-227ENST00000592342 SPRR2AP35326 72 aa7.91□□□□□ -1.14
DNMT1-227ENST00000592342 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
DNMT1-227ENST00000592342 LCE1AQ5T7P2 110 aa7.81□□□□□ -1.16
DNMT1-227ENST00000592342 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
DNMT1-227ENST00000592342 CDC42SE1Q9NRR8 79 aa7.79□□□□□ -1.16
DNMT1-227ENST00000592342 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
DNMT1-227ENST00000592342 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
DNMT1-227ENST00000592342 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
DNMT1-227ENST00000592342 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
DNMT1-227ENST00000592342 MT1EP04732 61 aa7.67□□□□□ -1.18
DNMT1-227ENST00000592342 SPRR2DP22532 72 aa7.64□□□□□ -1.19
DNMT1-227ENST00000592342 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
DNMT1-227ENST00000592342 ROMO1P60602 79 aa7.55□□□□□ -1.2
DNMT1-227ENST00000592342 KRTAP19-3Q7Z4W3 81 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms