RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 J3QR89 54 aa12.29□□□□□ -0.44
SMAD4-213ENST00000591914 SPRR2GQ9BYE4 73 aa12.29□□□□□ -0.44
SMAD4-213ENST00000591914 LINC00208Q96KT6 92 aa12.28□□□□□ -0.44
SMAD4-213ENST00000591914 KLKP1Q107X0 134 aa12.27□□□□□ -0.45
SMAD4-213ENST00000591914 MP68P56378 58 aa12.22□□□□□ -0.45
SMAD4-213ENST00000591914 A8MUN3 132 aa12.21□□□□□ -0.45
SMAD4-213ENST00000591914 KRTAP19-8Q3LI54 63 aa12.2□□□□□ -0.46
SMAD4-213ENST00000591914 MT1BP07438 61 aa12.19□□□□□ -0.46
SMAD4-213ENST00000591914 SYNE2Q8WXH0 6885 aaKnown RBP12.18□□□□□ -0.46
SMAD4-213ENST00000591914 NDUFC1O43677 76 aa12.18□□□□□ -0.46
SMAD4-213ENST00000591914 Q5VV11 94 aa12.17□□□□□ -0.46
SMAD4-213ENST00000591914 IMUPQ9GZP8 106 aa12.14□□□□□ -0.47
SMAD4-213ENST00000591914 CRIPTQ9P021 101 aa12.11□□□□□ -0.47
SMAD4-213ENST00000591914 H0YAA0 97 aa12.1□□□□□ -0.47
SMAD4-213ENST00000591914 H3BPC8 53 aa12.08□□□□□ -0.48
SMAD4-213ENST00000591914 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
SMAD4-213ENST00000591914 A6NN06 94 aa11.99□□□□□ -0.49
SMAD4-213ENST00000591914 ADM2Q7Z4H4 148 aa11.92□□□□□ -0.5
SMAD4-213ENST00000591914 DMAC1Q96GE9 116 aa11.91□□□□□ -0.5
SMAD4-213ENST00000591914 KRTAP10-5P60370 271 aa11.89□□□□□ -0.51
SMAD4-213ENST00000591914 MT-ATP8P03928 68 aa11.88□□□□□ -0.51
SMAD4-213ENST00000591914 K7ERU9 68 aa11.87□□□□□ -0.51
SMAD4-213ENST00000591914 KRTAP6-3Q3LI67 103 aa11.86□□□□□ -0.51
SMAD4-213ENST00000591914 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
SMAD4-213ENST00000591914 TRAV7A0A075B6U4 112 aa11.75□□□□□ -0.53
SMAD4-213ENST00000591914 P0C880 135 aa11.68□□□□□ -0.54
SMAD4-213ENST00000591914 C20orf197Q8N268 126 aa11.66□□□□□ -0.54
SMAD4-213ENST00000591914 R4GN34 69 aa11.62□□□□□ -0.55
SMAD4-213ENST00000591914 ACYP2P14621 99 aa11.61□□□□□ -0.55
SMAD4-213ENST00000591914 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
SMAD4-213ENST00000591914 M0QZ58 72 aa11.52□□□□□ -0.57
SMAD4-213ENST00000591914 PLAC4Q8WY50 150 aa11.49□□□□□ -0.57
SMAD4-213ENST00000591914 SNURFQ9Y675 71 aa11.48□□□□□ -0.57
SMAD4-213ENST00000591914 MT1XP80297 61 aa11.46□□□□□ -0.57
SMAD4-213ENST00000591914 PRO2289Q9P1D8 64 aa11.46□□□□□ -0.57
SMAD4-213ENST00000591914 NEBP20929 6669 aa11.45□□□□□ -0.58
SMAD4-213ENST00000591914 SPTSSBQ8NFR3 76 aa11.45□□□□□ -0.58
SMAD4-213ENST00000591914 MUC12Q9UKN1 5478 aa11.42□□□□□ -0.58
SMAD4-213ENST00000591914 KRTAP5-9P26371 169 aa11.39□□□□□ -0.59
SMAD4-213ENST00000591914 SERP2Q8N6R1 65 aa11.38□□□□□ -0.59
SMAD4-213ENST00000591914 CHKB-CPT1BH3BT56 60 aa11.37□□□□□ -0.59
SMAD4-213ENST00000591914 SPANXA2-OT1Q8N9U9 137 aa11.36□□□□□ -0.59
SMAD4-213ENST00000591914 LINC01554Q52M75 96 aa11.34□□□□□ -0.59
SMAD4-213ENST00000591914 KMT2DO14686 5537 aa11.26□□□□□ -0.61
SMAD4-213ENST00000591914 MDN1Q9NU22 5596 aa11.17□□□□□ -0.62
SMAD4-213ENST00000591914 KRTAP12-2P59991 146 aa11.17□□□□□ -0.62
SMAD4-213ENST00000591914 COX7CP15954 63 aa11.04□□□□□ -0.64
SMAD4-213ENST00000591914 COA5Q86WW8 74 aa11.02□□□□□ -0.65
SMAD4-213ENST00000591914 KRTAP8-1Q8IUC2 63 aa11.02□□□□□ -0.65
SMAD4-213ENST00000591914 SPRR2FQ96RM1 72 aa11.02□□□□□ -0.65
SMAD4-213ENST00000591914 KRTAP20-1Q3LI63 56 aa10.97□□□□□ -0.65
SMAD4-213ENST00000591914 KRTAP13-4Q3LI77 160 aa10.96□□□□□ -0.65
SMAD4-213ENST00000591914 KRTAP10-7P60409 375 aaPredicted RBP10.92□□□□□ -0.66
SMAD4-213ENST00000591914 KRTAP4-8A0A0G2JLE6 195 aa10.91□□□□□ -0.66
SMAD4-213ENST00000591914 KRTAP4-8Q9BYQ9 185 aa10.91□□□□□ -0.66
SMAD4-213ENST00000591914 KRTAP10-12P60413 245 aa10.89□□□□□ -0.67
SMAD4-213ENST00000591914 H7BZZ5 65 aa10.88□□□□□ -0.67
SMAD4-213ENST00000591914 CYSTM1Q9H1C7 97 aa10.88□□□□□ -0.67
SMAD4-213ENST00000591914 SPRR2EP22531 72 aa10.84□□□□□ -0.67
SMAD4-213ENST00000591914 SPRR2BP35325 72 aa10.84□□□□□ -0.67
SMAD4-213ENST00000591914 SPRR2AP35326 72 aa10.84□□□□□ -0.67
SMAD4-213ENST00000591914 SEC61GP60059 68 aa10.77□□□□□ -0.69
SMAD4-213ENST00000591914 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
SMAD4-213ENST00000591914 LCE1AQ5T7P2 110 aa10.74□□□□□ -0.69
SMAD4-213ENST00000591914 CAMK2N1Q7Z7J9 78 aa10.68□□□□□ -0.7
SMAD4-213ENST00000591914 KRTAP2-3P0C7H8 128 aa10.67□□□□□ -0.7
SMAD4-213ENST00000591914 ANAPC13Q9BS18 74 aa10.67□□□□□ -0.7
SMAD4-213ENST00000591914 KRTAP2-4Q9BYR9 128 aa10.67□□□□□ -0.7
SMAD4-213ENST00000591914 A0A1B0GU33 70 aa10.61□□□□□ -0.71
SMAD4-213ENST00000591914 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
SMAD4-213ENST00000591914 A0A0D9SG42 100 aa10.59□□□□□ -0.71
SMAD4-213ENST00000591914 SPRR2DP22532 72 aa10.48□□□□□ -0.73
SMAD4-213ENST00000591914 CCDC179H3BU77 68 aa10.47□□□□□ -0.73
SMAD4-213ENST00000591914 A0A1B0GU69 56 aa10.44□□□□□ -0.74
SMAD4-213ENST00000591914 SPINT4Q6UDR6 99 aa10.43□□□□□ -0.74
SMAD4-213ENST00000591914 KRTAP12-1P59990 96 aa10.42□□□□□ -0.74
SMAD4-213ENST00000591914 KRTAP2-2Q9BYT5 123 aa10.34□□□□□ -0.75
SMAD4-213ENST00000591914 KRTAP2-1Q9BYU5 128 aa10.34□□□□□ -0.75
SMAD4-213ENST00000591914 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-213ENST00000591914 SMIM26A0A096LP01 95 aa10.3□□□□□ -0.76
SMAD4-213ENST00000591914 KRTAP19-7Q3SYF9 63 aa10.25□□□□□ -0.77
SMAD4-213ENST00000591914 A8MU10 97 aa10.22□□□□□ -0.77
SMAD4-213ENST00000591914 LCE3BQ5TA77 95 aa10.19□□□□□ -0.78
SMAD4-213ENST00000591914 MT1EP04732 61 aa10.15□□□□□ -0.78
SMAD4-213ENST00000591914 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
SMAD4-213ENST00000591914 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
SMAD4-213ENST00000591914 TMEM258P61165 79 aa10.08□□□□□ -0.8
SMAD4-213ENST00000591914 LCE5AQ5TCM9 118 aa10.07□□□□□ -0.8
SMAD4-213ENST00000591914 KRTAP19-3Q7Z4W3 81 aa10.03□□□□□ -0.8
SMAD4-213ENST00000591914 KRTAP19-5Q3LI72 72 aa9.99□□□□□ -0.81
SMAD4-213ENST00000591914 C10orf95Q9H7T3 257 aa9.95□□□□□ -0.82
SMAD4-213ENST00000591914 DSTQ03001 7570 aaKnown RBP9.91□□□□□ -0.82
SMAD4-213ENST00000591914 TNP1P09430 55 aa9.88□□□□□ -0.83
SMAD4-213ENST00000591914 UQCR11O14957 56 aa9.83□□□□□ -0.84
SMAD4-213ENST00000591914 MT1GP13640 62 aa9.81□□□□□ -0.84
SMAD4-213ENST00000591914 LCE3AQ5TA76 89 aa9.81□□□□□ -0.84
SMAD4-213ENST00000591914 PP632Q6XCG6 107 aa9.71□□□□□ -0.86
SMAD4-213ENST00000591914 MT1LQ93083 61 aa9.71□□□□□ -0.86
SMAD4-213ENST00000591914 MT1MQ8N339 61 aa9.65□□□□□ -0.86
SMAD4-213ENST00000591914 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms