RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SMIM26A0A096LP01 95 aa3.59□□□□□ -1.83
NPC1-208ENST00000590301 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
NPC1-208ENST00000590301 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
NPC1-208ENST00000590301 PSPHP1O15172 72 aa3.58□□□□□ -1.84
NPC1-208ENST00000590301 Q5W150 140 aa3.58□□□□□ -1.84
NPC1-208ENST00000590301 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
NPC1-208ENST00000590301 Q8N9L7 120 aa3.57□□□□□ -1.84
NPC1-208ENST00000590301 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
NPC1-208ENST00000590301 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
NPC1-208ENST00000590301 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
NPC1-208ENST00000590301 F8W1H4 67 aa3.54□□□□□ -1.84
NPC1-208ENST00000590301 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
NPC1-208ENST00000590301 GTF2H5Q6ZYL4 71 aa3.54□□□□□ -1.84
NPC1-208ENST00000590301 ETDBQ3ZM63 59 aa3.53□□□□□ -1.84
NPC1-208ENST00000590301 TP53AIP1Q9HCN2 124 aa3.52□□□□□ -1.85
NPC1-208ENST00000590301 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
NPC1-208ENST00000590301 C1orf64Q8NEQ6 169 aa3.49□□□□□ -1.85
NPC1-208ENST00000590301 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
NPC1-208ENST00000590301 S4R3F8 94 aa3.49□□□□□ -1.85
NPC1-208ENST00000590301 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
NPC1-208ENST00000590301 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
NPC1-208ENST00000590301 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
NPC1-208ENST00000590301 LCA10Q71F78 164 aa3.45□□□□□ -1.86
NPC1-208ENST00000590301 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
NPC1-208ENST00000590301 Q5VV11 94 aa3.44□□□□□ -1.86
NPC1-208ENST00000590301 ACYP1P07311 99 aa3.43□□□□□ -1.86
NPC1-208ENST00000590301 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
NPC1-208ENST00000590301 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
NPC1-208ENST00000590301 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
NPC1-208ENST00000590301 A6NN06 94 aa3.42□□□□□ -1.86
NPC1-208ENST00000590301 CYP4F30PQ9H0H9 118 aa3.42□□□□□ -1.86
NPC1-208ENST00000590301 A0A1B0GV90 55 aa3.41□□□□□ -1.86
NPC1-208ENST00000590301 MT1BP07438 61 aa3.41□□□□□ -1.86
NPC1-208ENST00000590301 KLKP1Q107X0 134 aa3.41□□□□□ -1.86
NPC1-208ENST00000590301 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
NPC1-208ENST00000590301 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
NPC1-208ENST00000590301 NEBP20929 6669 aa3.39□□□□□ -1.87
NPC1-208ENST00000590301 ATOX1O00244 68 aa3.38□□□□□ -1.87
NPC1-208ENST00000590301 MP68P56378 58 aa3.38□□□□□ -1.87
NPC1-208ENST00000590301 UQCRQO14949 82 aa3.37□□□□□ -1.87
NPC1-208ENST00000590301 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
NPC1-208ENST00000590301 IMUPQ9GZP8 106 aa3.37□□□□□ -1.87
NPC1-208ENST00000590301 H0YAA0 97 aa3.36□□□□□ -1.87
NPC1-208ENST00000590301 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
NPC1-208ENST00000590301 A0A087WVE0 104 aa3.35□□□□□ -1.87
NPC1-208ENST00000590301 A8MUN3 132 aa3.35□□□□□ -1.87
NPC1-208ENST00000590301 NDUFC1O43677 76 aa3.35□□□□□ -1.87
NPC1-208ENST00000590301 H0Y9P7 68 aa3.34□□□□□ -1.87
NPC1-208ENST00000590301 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
NPC1-208ENST00000590301 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
NPC1-208ENST00000590301 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
NPC1-208ENST00000590301 K7ERS5 55 aa3.3□□□□□ -1.88
NPC1-208ENST00000590301 MT3P25713 68 aa3.29□□□□□ -1.88
NPC1-208ENST00000590301 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
NPC1-208ENST00000590301 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
NPC1-208ENST00000590301 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
NPC1-208ENST00000590301 KMT2DO14686 5537 aa3.29□□□□□ -1.88
NPC1-208ENST00000590301 LINC00208Q96KT6 92 aa3.28□□□□□ -1.88
NPC1-208ENST00000590301 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
NPC1-208ENST00000590301 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
NPC1-208ENST00000590301 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
NPC1-208ENST00000590301 H3BPC8 53 aa3.24□□□□□ -1.89
NPC1-208ENST00000590301 J3QR89 54 aa3.24□□□□□ -1.89
NPC1-208ENST00000590301 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
NPC1-208ENST00000590301 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
NPC1-208ENST00000590301 R4GN34 69 aa3.22□□□□□ -1.89
NPC1-208ENST00000590301 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
NPC1-208ENST00000590301 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
NPC1-208ENST00000590301 MT1XP80297 61 aa3.19□□□□□ -1.9
NPC1-208ENST00000590301 SCGB1A1P11684 91 aa3.18□□□□□ -1.9
NPC1-208ENST00000590301 P0C880 135 aa3.17□□□□□ -1.9
NPC1-208ENST00000590301 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
NPC1-208ENST00000590301 SMIM20Q8N5G0 67 aa3.17□□□□□ -1.9
NPC1-208ENST00000590301 TRAV7A0A075B6U4 112 aa3.16□□□□□ -1.9
NPC1-208ENST00000590301 A6NED7 52 aa3.16□□□□□ -1.9
NPC1-208ENST00000590301 K7ERU9 68 aa3.16□□□□□ -1.9
NPC1-208ENST00000590301 M0QZ58 72 aa3.16□□□□□ -1.9
NPC1-208ENST00000590301 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
NPC1-208ENST00000590301 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
NPC1-208ENST00000590301 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
NPC1-208ENST00000590301 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
NPC1-208ENST00000590301 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
NPC1-208ENST00000590301 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
NPC1-208ENST00000590301 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
NPC1-208ENST00000590301 ACYP2P14621 99 aa3.12□□□□□ -1.91
NPC1-208ENST00000590301 SPRR2EP22531 72 aa3.12□□□□□ -1.91
NPC1-208ENST00000590301 SPRR2BP35325 72 aa3.12□□□□□ -1.91
NPC1-208ENST00000590301 SPRR2AP35326 72 aa3.12□□□□□ -1.91
NPC1-208ENST00000590301 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
NPC1-208ENST00000590301 CHKB-CPT1BH3BT56 60 aa3.06□□□□□ -1.92
NPC1-208ENST00000590301 SNURFQ9Y675 71 aa3.06□□□□□ -1.92
NPC1-208ENST00000590301 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
NPC1-208ENST00000590301 SERP2Q8N6R1 65 aa3.04□□□□□ -1.92
NPC1-208ENST00000590301 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
NPC1-208ENST00000590301 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
NPC1-208ENST00000590301 SPRR2DP22532 72 aa3.02□□□□□ -1.93
NPC1-208ENST00000590301 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
NPC1-208ENST00000590301 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
NPC1-208ENST00000590301 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
NPC1-208ENST00000590301 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms